Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1635 ATGGATGGTGTTGAAATGGGTTTCTCTGTTTTTTGTGTTTCGGTTTTCAACTCGGAAGGGGAAAAGAAGGATGAAGCCTCCATGGGTGAATTGAAAGACCTAGAACATGGTGATGCAGTGCCGGCTGAAAATGCAGGAATCTTTCGGGTTCTTTCCCTTGCAAAGCCTGAAGCTGGGAAGCTCATAGTTGCAACTTTGGCTCTCTTGATTTCATCCATTGCAGATCTCTTAGTTCCAAAGTTTGGTGGGAAGATAATTGACATTGTCTCAGGAGATATTCAGGCTCCTGAAGACAAAATTAAAGCATTGGATGATGTCAAGAGCACCATATTATATGTCTTTCTGGTTGTTTTTTTTGGTTCAGCTTCCGCGGCCCTTCAGTGTTGGCTTTTTTCTTCTGCTAGTGAAACGGTTGTTGCTCGGCTGAGAAAAAATTTGTTTAGTCACCTTCTACTCCAGGAGATAGCCTTCTTTGATGTTACTCGTACTGGGGAACTTCTGAATAGGCTATCTGAAGATACACAGATCATAAAAAATGCTGCAACTACCAGTCTGTCTCATGTCCTGAGTTGCTTCTCAACTTCATTTATTGGTCTTGTCTTCATGTTTTCAACATCATGGAAGTTAACATTGTTGGCTTTGCTTGTCGTGCCTCCTACGTTTGTTGCTGTCCGTAAATTGGGTGCCTTCCTACGTGACCTTTCTCATAAAACTCAAGCTGCTGCTGCAGAAGCTGCTTCAATTGCTGAGGAATCCTTTGGTGCCATAAGGACAGTCAGATCTTTTGCCCAAGAAGAATATGAAATATCACGTTACTCTGAGAAAGTTGATGAGACACTTAAGCTCGGACTTAAAGAAGCTAAAGTTGATGGGCTCTTTTCTGGAGGCATCTATACAGCAACTTCATTGCCCATTTTTGTGGTCGTTGTATATGGAGCTTATTTGACAATTACAGGTTCCATGTCCGCTGGTGATCTCACATCTTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTATATACTATGGCTATGAAAACTGTGGGAGCGAGCAGACGGGTATTTCAACTTCTGGATCGCATCTCAACGATGCCAAAGTCAGGAAATAAGTGTCCTCTGGGTGATCAAGATGGGGAAGTGGAACTCGATGACGTCTGGTTTGCATATCCATCACGTCCTAGTCATATGGTACTTAAGGGAATTACAATGAAACTGCACCCTGGATCTAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGAGCACAATAGCAAACTTAATTGAAAGATTTTACGACCCAACCAAGGGAAGGATTCTGCTGAATAGGATTCCTCTGGTGGAAATTTCACATGAACATCTACACAAGAAGATAAGTATTGTGAGCCAGGAGCCTGTACTTTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTTAACTCTGTGGATATAGAAAATGCAGCTAAAATGGCGAATGCACACGAGTTTATATCGAGATTCCCGGATAGATACAAGAGCCAGGTTGGAGAGCGTGGGGTGAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCTTTGCTTATGGACCCCAGAATTCTTCTCTTGGATGAAGCCACTAGTGCCCTTGATGCTGAAAGTGAATATTTAGTACAGGATGCCATGGATTCTCTGATGAAGGGAAGGACAGTTCTTGTGATTGCTCATAGGCTTTCAACTGTAAAAAGTGCTGATATTGTTGCAGTTGTTTCTGATGGCCAAATTGTTGAGAGAGGCACTCATGAAGAGCTTCTCAGCAAGAATGGTGTCTATTCTGCATTAGTCAGAAGACAACTACAagcatcaccatcatcatcatcatcttcaatcTCTATAATTCAAATGTGA 1926 0.4169 MDGVEMGFSVFCVSVFNSEGEKKDEASMGELKDLEHGDAVPAENAGIFRVLSLAKPEAGKLIVATLALLISSIADLLVPKFGGKIIDIVSGDIQAPEDKIKALDDVKSTILYVFLVVFFGSASAALQCWLFSSASETVVARLRKNLFSHLLLQEIAFFDVTRTGELLNRLSEDTQIIKNAATTSLSHVLSCFSTSFIGLVFMFSTSWKLTLLALLVVPPTFVAVRKLGAFLRDLSHKTQAAAAEAASIAEESFGAIRTVRSFAQEEYEISRYSEKVDETLKLGLKEAKVDGLFSGGIYTATSLPIFVVVVYGAYLTITGSMSAGDLTSFILYSLTVGHSISGLSGLYTMAMKTVGASRRVFQLLDRISTMPKSGNKCPLGDQDGEVELDDVWFAYPSRPSHMVLKGITMKLHPGSKVALVGPSGGGKSTIANLIERFYDPTKGRILLNRIPLVEISHEHLHKKISIVSQEPVLFNCSIEENIAYGFDGKVNSVDIENAAKMANAHEFISRFPDRYKSQVGERGVRLSGGQKQRIAIARALLMDPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADIVAVVSDGQIVERGTHEELLSKNGVYSALVRRQLQASPSSSSSSISIIQM 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1635 641 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 352 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g1635 641 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 21 628 - -
Sto3g1635 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 624 IPR027417 -
Sto3g1635 641 CDD ABC_MTABC3_MDL1_MDL2 386 624 - -
Sto3g1635 641 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 386 623 IPR003439 GO:0005524
Sto3g1635 641 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524
Sto3g1635 641 SUPERFAMILY ABC transporter transmembrane region 49 365 IPR036640 GO:0005524|GO:0016021
Sto3g1635 641 Gene3D ABC transporter type 1, transmembrane domain 45 375 IPR036640 GO:0005524|GO:0016021
Sto3g1635 641 Gene3D - 380 628 IPR027417 -
Sto3g1635 641 PIRSF ABC_prm/ATPase_B 9 640 - -
Sto3g1635 641 Pfam ABC transporter 404 554 IPR003439 GO:0005524
Sto3g1635 641 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 628 IPR039421 -
Sto3g1635 641 SMART AAA_5 413 606 IPR003593 -
Sto3g1635 641 Pfam ABC transporter transmembrane region 61 335 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1635 Sto-Chr3 12315887 12324161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1635 64 637 Calmodulin-binding Proteins AT2G36910 37.793 4.43e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1635 - - zju:107419028 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1635 3 12315887 12324161 Sto3g1635 3 12315887 12324161 ECH