Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1634 atgagaCGCAGCACTTGCTCAGAAATGTCCGTATTAAGCAACAGACAAAGCAGAAGCGCAAAACCAATGTCCAAATCAATGCCATCTCTGCTCTTGTGGTCTTCGCGCAGTAAAGGAGTTTGGAATATGGATGGTGTTGAAATGGGTTTCTCTGTTTTTTGTGTTTTAGTTTTCAACTCAAAGGATGAAGCCTCCATGGGTGAATTGAAAGACCTTGAACATGGTGATGCAGTGCCGGCTGAAAATGCAGGAATCTTTCGGGTTCTTTCCCTTGCAAAGCCTGAAGCTGGGAAGCTGATAGTTGCAACTTTGGCTCTCTTGATTTCATCCATTGCAGATCTTTTAGTTCCAAAGTTTGGTGGGAAGATAATTGGCATTGTCTCAGGAGATATTCAGGCTCCTGAAGATAAAGTTAAAGCATTGGATGATGTCAAGAACACCATATTATATGTCTTTCTGGTTGTTTTTTTTGGTTCAGCTTCCACGGCCCTTCGGAGTTGGCTTTTTTCCTCCGCTAGTGAAACGGTTGTTGCTCGGCTGAGAAAAGATTTGTTTAGTCACCTTCTACTCCAAGAGATAGCCTTCTTTGATGTTACTCGTACTGGGGAACTTCTAAATAGGCTATCTGAAGATACAGAGATCATAAAAAATGCTGCAACTACCAATCTGTCTCATGCTTTGAGTTGCTTCTCAATTTCATTTATTGGTCTTGTCTTCATGTTTTCAACATCATGGAAGTTAACATTGTTGGCTTTGCTTGTTGTGCCTCCTACGTTTGTTGCTGTCCGTAAATTTGGTGCCTTCCTAGGTGACCTTTCTCATAAAACTCAAGCTGCAGCTGCAGAAGCTGCTTCAATTGCTGAGGAATCCTTTGGTGCCATAAGGACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATATCACGTTACTCTGAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAAGAAGCTAAAGTTCATGGACTCTTTTCTGGAGGCATCTTTACAGCAACTTCATTGCCCATTTTTGTGGTTGTTGTATATGGAGCTTATTTGACAATTACAGGTTCCATGTCCGCTGGTGATCTTACATCTTTCATTCTTTATAGTCTCACAGTGGGACCTTCTATATCTGGTCTCCCAGAATTATATACTATGGCTATGAAAACTGTGGGAGCGAGCAGACGGGGAATTACAATGAAACTGCACCCTAGCTCTAAGGTTGCTCTTGTTGGTTCAAGTGGTGGTGGAAAGAGCACAATAGCAAACTTAATTGAAAGATTTTACGACCCAACCAAGGGAATGATTCTGCTGAATAGGATTCCTCTGGTGGACATTTCACATGAACATCTACACAAGAAGATAAGCATTGTGAGCCAGGAGCCTGTACTTTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTTAACTCTGTGGATATAGAAAAAGCAGCTAAAATGGCGAATGCACACGAGTTTATATCGAAATTCCCGGATAAATACAAGACCCAGGTTGGAGAGCGTGGGGTGAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCTTTGCTTATGGACCCCAAAATTCTTCTCTTGGATGAAGCCACTAGTGCCCTTGATGCTGAAAGTGAATATTTAGTACAGGATGCCATGGATTCTCTGATGAAGGGAAGGACAGTTCTTGTGATTGCTCATAGGCTTTCAACTGTAAAAAGTGCTGATATTGTTGCAGTTGTTTCTGATGGCCAAATTGTTGAGAGAGGCACTCATGAAGAGCTTCTCAGCAAGAATGGTGTCTATTCTGCATTAGTCAGAAGACAACTACAagcatcaccatcatcatcatcatcttcaatcTCTATAATTCAAATGTGA 1902 0.4075 MRRSTCSEMSVLSNRQSRSAKPMSKSMPSLLLWSSRSKGVWNMDGVEMGFSVFCVLVFNSKDEASMGELKDLEHGDAVPAENAGIFRVLSLAKPEAGKLIVATLALLISSIADLLVPKFGGKIIGIVSGDIQAPEDKVKALDDVKNTILYVFLVVFFGSASTALRSWLFSSASETVVARLRKDLFSHLLLQEIAFFDVTRTGELLNRLSEDTEIIKNAATTNLSHALSCFSISFIGLVFMFSTSWKLTLLALLVVPPTFVAVRKFGAFLGDLSHKTQAAAAEAASIAEESFGAIRTVRSFAQEEYEISRYSEKVDETLKLGLKEAKVHGLFSGGIFTATSLPIFVVVVYGAYLTITGSMSAGDLTSFILYSLTVGPSISGLPELYTMAMKTVGASRRGITMKLHPSSKVALVGSSGGGKSTIANLIERFYDPTKGMILLNRIPLVDISHEHLHKKISIVSQEPVLFNCSIEENIAYGFDGKVNSVDIEKAAKMANAHEFISKFPDKYKTQVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADIVAVVSDGQIVERGTHEELLSKNGVYSALVRRQLQASPSSSSSSISIIQM 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1634 633 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 397 620 IPR039421 -
Sto3g1634 633 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 60 397 IPR039421 -
Sto3g1634 633 Pfam ABC transporter 398 546 IPR003439 GO:0005524
Sto3g1634 633 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524
Sto3g1634 633 SUPERFAMILY ABC transporter transmembrane region 87 397 IPR036640 GO:0005524|GO:0016021
Sto3g1634 633 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 60 397 - -
Sto3g1634 633 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 397 620 - -
Sto3g1634 633 Pfam ABC transporter transmembrane region 99 373 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g1634 633 MobiDBLite consensus disorder prediction 1 23 - -
Sto3g1634 633 Gene3D ABC transporter type 1, transmembrane domain 83 396 IPR036640 GO:0005524|GO:0016021
Sto3g1634 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 615 IPR003439 GO:0005524
Sto3g1634 633 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 100 390 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto3g1634 633 Gene3D - 397 620 IPR027417 -
Sto3g1634 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 616 IPR027417 -
Sto3g1634 633 SMART AAA_5 405 598 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1634 Sto-Chr3 12302547 12310559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1634 102 629 Calmodulin-binding Proteins AT2G36910 35.678 1.02e-90 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1634 - - gmx:100818615 801.971