Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1629 ATGATGATTGGGAATTCAAGAAAAGGTAATCATCAAGGGAAGCAAGAGGGAGATAGTGATGATCATCATTATaacattattaataataataatggtatAATAGGGAAGTACTTGTACCCAAATAAGGTATTaggctcttcttcttcttgggcTTCGAGACAGTGGTCGTTGCGAAACCCTAGGATCGTTCAGGTGTCGCGGGCGTTTGGAGGTAAGGACCGGCACAGCAAGGTGTGCACCATAAGAGGTCTGAGGGACAGAAGGATCAGGCTGTCTATGCCCACAGCAGTTCAACTCTACGAGCTTCAGGACCGGCTCGGCTTGAGCCAGCCAAGTAAGGTCATTGATTGGCTCATTGAAGCCACTAAGGCTGACATTGATAAGCTCCCTCCCCTCCAATTCCCTCATGGCTTCCCTCATCAATTCCTTCATCCTAAAAACCTAATTTCTCCTTCTCCTCAAATCCATCTTTCTAATTCTTCtttgaatattaattatgatcATGGTAGTAATTTCATAGATCATCATGAAAGATTATCTCTGTGGGATCAGAAAGGGAAGTGGGTGATGAAAACAAataatgaagatgatgatggtggaaTTGTAGTACTACCTTTTACTTCTAGCCTACTTGATGATTCTGATCATAATCAAAAGCACACTACTGCTCCTTCTTCATGA 681 0.3818 MMIGNSRKGNHQGKQEGDSDDHHYNIINNNNGIIGKYLYPNKVLGSSSSWASRQWSLRNPRIVQVSRAFGGKDRHSKVCTIRGLRDRRIRLSMPTAVQLYELQDRLGLSQPSKVIDWLIEATKADIDKLPPLQFPHGFPHQFLHPKNLISPSPQIHLSNSSLNINYDHGSNFIDHHERLSLWDQKGKWVMKTNNEDDDGGIVVLPFTSSLLDDSDHNQKHTTAPSS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1629 226 MobiDBLite consensus disorder prediction 1 24 - -
Sto3g1629 226 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 206 IPR005333 GO:0003700
Sto3g1629 226 Pfam TCP family transcription factor 71 152 IPR017887 -
Sto3g1629 226 ProSiteProfiles TCP domain profile. 71 129 IPR017887 -
Sto3g1629 226 PANTHER TRANSCRIPTION FACTOR TCP17 2 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1629 Sto-Chr3 12238955 12239992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1629 50 138 TCP Transcription Factor Family AT5G60970 82.022 2.07e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto3g1629 TCP 4.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1629 - - pavi:110753385 186.422