Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1626 ATGATGCTTGGGCTGAATTCAAGAGAAGgctcttcttcttcttcttcttcttgggcCTCGAGACAGTGGTCGTTGCGAAACCCTAGGATCGTTCAGGTGCCGCGGACGTTCAAAGGGAAGGACAGGCACAGTAGGGTGTGCACCATAAGAGGTCTGAAGGACAGAAGGATTAGACTGTCTGTGCCCATGGCAGTTCAGCTCTACGAGCTTCAAGACCGGCTCGGCTTGAGCCGGCCAAGTAAGGTCATCGATTGGCTCATTGAAGTCACTAAGGCTGACATTGATAAGCTCCCTCCCCTCCAATTCCCTCATGGCTTCCCTCATCAATTCCTTCATCCTCAAACCCTAATTCCTCCTTCTCCTCAAATCCACCTTTCTAATTTCATAGATCTTCATGAAAGATTATCTCTGTGGGATCGGAAAGGGAAGTGGATGGTGAAAACAAATAATGAAGAGGATGATGGTAGAATTATTGGTGggaataatactaataataattgttattattattattctgggCAATATTCTTCAAATAATCTATCTCTATTGGGAAGCCATGGAGGATTATTTTTTCCAAATAACTCGAATTCCCAAGTAGATAATCCTCCTGCTGCTTTAAATTTAGCCCACAGtagtaatagtaatagtaataataGTGTGCCATTCCCATCTCCATCTAATTCTTCTGGTGGTGGTGCATCAATTTTTGGTCATTTTccttacttaaataataatgatatgaaTTACATGACTAATTATAACTACAGTAAAATTCTCTTGGAAACATCACTTTCATGA 798 0.3722 MMLGLNSREGSSSSSSSWASRQWSLRNPRIVQVPRTFKGKDRHSRVCTIRGLKDRRIRLSVPMAVQLYELQDRLGLSRPSKVIDWLIEVTKADIDKLPPLQFPHGFPHQFLHPQTLIPPSPQIHLSNFIDLHERLSLWDRKGKWMVKTNNEEDDGRIIGGNNTNNNCYYYYSGQYSSNNLSLLGSHGGLFFPNNSNSQVDNPPAALNLAHSSNSNSNNSVPFPSPSNSSGGGASIFGHFPYLNNNDMNYMTNYNYSKILLETSLS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1626 265 Pfam TCP family transcription factor 39 111 IPR017887 -
Sto3g1626 265 ProSiteProfiles TCP domain profile. 39 97 IPR017887 -
Sto3g1626 265 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 244 IPR005333 GO:0003700
Sto3g1626 265 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 12 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1626 Sto-Chr3 12187347 12188270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1626 18 106 TCP Transcription Factor Family AT5G60970 76.404 4.36e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto3g1626 TCP 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1626 - - cam:101498052 164.851