Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1592 ATGTCAGAGCAGGAAACGCAGTCATGGAGCTTCCTGTTCTTCTGTTTCTTAGTCTTTTTCTCAGGTAAATTTGCTGCGGGAGATTCTCTAAACACAGAGAGAGAAATTCTGCTAAATCTAAAATCTTACCTTGACAATCAAACTCTGGCGGATCAAGGAAGATACACACAATGGAACACAACCACCTCAAACCCATGTGAATGGCCAGGAATCTCCTGcagcttcttctccttctccggCACGGAggaggcggcggcggcggcggtggtcgGCGTGGACCTCTCCGACAGCAACATCTCCGGCGAGATTTTCAAGAACTTCTCTCAGCTCACCCACCTCACTCACCTTGACCTCTCTGGGAACACCATCTCAGGGGGAATTCCAGAGGATTTGAGTCTATGCATCAACCTCGTATACCTCAATCTGTCCCATAATCTTCTTGAGGGTGAGATCATGAGTTTGAGTGGCTTGAGAAAGTTGGAGACTTTGGACTTGTCGGAGAATAGGCTTCATGGGGATGTTGGGTTGGATTTTCCTGCCAATATCTGTGACAACCTTGTGAGTCTGAACATTTCTGGGAATAACTTTAGTGGTGAGATTGATCGTTGCTTTGATCAATGTTTGAAGCTGAAGTATTTGGATTTGAGCACCAATAATCTAAGTGGGGGTGTTTGGATGGGGTTTTCAAGGCTGAAGATGTTTTCAGTTTCTGAGAATTTTCTCACTGGGGTGATCCCTTCAGAGATTTTCCCGGAAAATTGTACTCTTGAAGTGCTTGATGTTTCACACAATGGGTTTTCTGGGTATGCTCCAAAGAATGTTAGTAATTGCAAGAATCTAGAAATTCTGAATCTTTCTAGTAACAACTTCTCTGGGGATATTCCCAATGAGTTTGGATCCATTTTGGGTCTTCAAGCTTTGTACTTGGCCAACAATAGTTTCACCAGTCAAATCCCAGAGACAATCTTGAACTTGAGCAAGCTGGCTTCCTTGGATTTAAGCAGAAACAGTTTTGGTGGGGAGATTCAAGAGATTTTTGGGAGATTGAAGCAAGTGAAGTTCCTTCTATTGCATTCAAATTCATACACAGGAGGATTGATCTCGTCAGGAATTCTTGAATTGCCAAACATCTCTCACTTGGATCTCAGTCTGAACAATCTTTCAGGTCCATTGCCTATTGAAATCTCTCACATGTCTAGCATCAAGTTCTTGATGTTAGCCTATAATGACTTTAGTGGACCTATTCCACATGAGTTTGGAAAAATGGCTCAAATTCAAGCACTTGATCTGTCCTTCAACAATCTCACAGGTCCAATCCCACCAAGCTTTGGAAACCTCAGTTCTCTCCTTTGGTTGATGCTTGCCAACAATTCATTGAGTGGAGAAATCCCAAGAGAGTTGGGAAATTGCACCAGTTTGTTGTGGCTGAACCTTGAGAACAACAATCTCACTGGGAATTTCCCTTCTGAATTGACCAACATAGGAAGCAATGCCACGGCCACCTTCGAATTGAACCGGCGAGACGTTAATGGGATCGGAGCTGAATCCGGCGAGTGTCTAGCCATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAACTTTGTCTATAGTATCCTCACAAGGAAGAAATGTAGAAGCATTTGGGATCAGCTCCTCAAAGGGTATGGTTTTTTCCCCATTTGCTCATCTGGGTCATCTTTTCGATTACGTGATATATCTGGGTATGTTCAACTCAGTGGGAATAATCTCATGGGAGAAGTTCCTCCACAAATTGGGAAGATGCAAAATTTCAGTATGCTACATTTGGGATTCAACAAATTTTCTGGGGAAATCCCTTCGGTAATGGGAGATTTGCCTCTTGTGGTGTTGAACCTAACGCAAAACAATTTCTCAGGTGAGATTCCATGGGACATTGGGAACCTAGAATGTCTACGAGATTTGGATTTGTCCTACAACAATTTCTCAGGAATCTTCCCAACAAGCTTGAACAACTTAACTGAGCTTAGTAAATTCAATATCTCCTACAACCCTTTGATTTCTGGAATGGTCCCATCAACAGGACAATTAGCCACATTCGACATGGATTCATACTTAGGAGACCCACTTTTGGACCTCCCAGATTTCATCAACAACAATGTGACAAAACATAAAAACACAACCTCACTCATAATAGACCCACAATTCaaaaacccttcaaaattctccatgttcttcatcttcctctccATGGCTCTTGCTTTCTCAGTGTTCGCACTCCTCTCTCTCATAATCTGCCTATTCATGAAAACCCCATCACAAGACCCAGAAGGATACCTATTGGAAAACACAAAAATTCGACACGACTCCAACAATTCCTCACCTTGGTCGCCGTCCTCATCGTCGTCCGACACAATCAAAATCATCCGCTTGAACAAGACAGCCTTCACACACGCAGACATCCTCAGAGCCACCGGTAACTTTTCCGACGACAGAGTCATTGGAAAAGGGGGGTTCGGCACCGTGTACAAAGGGGTGTTCCCCGATGGGAGAGAAGTGGCGGTGAAGAAGCTTCAAAGAGAAGGGATCGAAGGAGAGAAAGAGTTTCGAGCCGAAATGGAGGTTTTGAGTGGATCCGGATTCGGGTGGCCCCACCCGAATCTCGTCACGCTTTACGGGTGGTGCCTTGATGGGTCGAATAAGATCCTAATATATGAATACATGGAGGGAGGGAGCTTGGAGGATGTGATCACGGATAGGACGGTGCTGACGTGGAAGAGACGGTTGGAGATttctgctgacgtggcacgggCCCTGGTGTACTTGCACCATGAATGCTTCCCTCCTGTGGTCCATAGAGACGTGAAGGCTAGCAATGTGCTATTGGATAAGCAAGGGAAGGCTAAAGTTACGGACTTCGGGCTAGCCAGGGTGGTCGAGAACGGGGTTAGTCACGTGACCACCATGGTGGCAGGCACGGTGGGCTACGTGGCGCCCGAGTATGGTCAGACGTGGCAAGCTACCACGAAAGGTGACGTGTATAGTTTCGGGGTTCTGGCGATGGAACTGGCGACGGGCAGAAGGGCAATCGATGGAGGGGAAGAGAGTTTGTTGGAGTGGGCTCGACGGGTGATGGGCTATGGGTATAGGCTTGGGCTTGGGCATGGGCACGAGCATGGGCTTGGGCTGAGTCGGACAGTGATACCGGTCTTGTTGATGGGGTCTGGGCTTGGGGAGGGAGCGGAGGAGATGGGTGAGTTGTTGCGGATTGGGGTTAAGTGCACCGCCGAGGCGCCGCAGGCTAGGCCCAGCATGAAGGAGGTTCTAGCCATGTTGGTGAATGTGTTAGACCTTAAAGGAGGTTAA 3345 0.4484 MSEQETQSWSFLFFCFLVFFSGKFAAGDSLNTEREILLNLKSYLDNQTLADQGRYTQWNTTTSNPCEWPGISCSFFSFSGTEEAAAAAVVGVDLSDSNISGEIFKNFSQLTHLTHLDLSGNTISGGIPEDLSLCINLVYLNLSHNLLEGEIMSLSGLRKLETLDLSENRLHGDVGLDFPANICDNLVSLNISGNNFSGEIDRCFDQCLKLKYLDLSTNNLSGGVWMGFSRLKMFSVSENFLTGVIPSEIFPENCTLEVLDVSHNGFSGYAPKNVSNCKNLEILNLSSNNFSGDIPNEFGSILGLQALYLANNSFTSQIPETILNLSKLASLDLSRNSFGGEIQEIFGRLKQVKFLLLHSNSYTGGLISSGILELPNISHLDLSLNNLSGPLPIEISHMSSIKFLMLAYNDFSGPIPHEFGKMAQIQALDLSFNNLTGPIPPSFGNLSSLLWLMLANNSLSGEIPRELGNCTSLLWLNLENNNLTGNFPSELTNIGSNATATFELNRRDVNGIGAESGECLAMKRWIPADYPPFNFVYSILTRKKCRSIWDQLLKGYGFFPICSSGSSFRLRDISGYVQLSGNNLMGEVPPQIGKMQNFSMLHLGFNKFSGEIPSVMGDLPLVVLNLTQNNFSGEIPWDIGNLECLRDLDLSYNNFSGIFPTSLNNLTELSKFNISYNPLISGMVPSTGQLATFDMDSYLGDPLLDLPDFINNNVTKHKNTTSLIIDPQFKNPSKFSMFFIFLSMALAFSVFALLSLIICLFMKTPSQDPEGYLLENTKIRHDSNNSSPWSPSSSSSDTIKIIRLNKTAFTHADILRATGNFSDDRVIGKGGFGTVYKGVFPDGREVAVKKLQREGIEGEKEFRAEMEVLSGSGFGWPHPNLVTLYGWCLDGSNKILIYEYMEGGSLEDVITDRTVLTWKRRLEISADVARALVYLHHECFPPVVHRDVKASNVLLDKQGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAIDGGEESLLEWARRVMGYGYRLGLGHGHEHGLGLSRTVIPVLLMGSGLGEGAEEMGELLRIGVKCTAEAPQARPSMKEVLAMLVNVLDLKGG 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1592 1114 SMART serkin_6 821 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1592 1114 Gene3D Ribonuclease Inhibitor 29 179 IPR032675 -
Sto3g1592 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1109 - -
Sto3g1592 1114 Gene3D Ribonuclease Inhibitor 180 252 IPR032675 -
Sto3g1592 1114 SUPERFAMILY Protein kinase-like (PK-like) 795 1105 IPR011009 -
Sto3g1592 1114 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1109 - -
Sto3g1592 1114 Pfam Leucine Rich repeat 110 125 IPR001611 GO:0005515
Sto3g1592 1114 ProSiteProfiles Leucine-rich repeat profile. 112 134 IPR001611 GO:0005515
Sto3g1592 1114 SUPERFAMILY L domain-like 178 488 - -
Sto3g1592 1114 SMART LRR_typ_2 374 398 IPR003591 -
Sto3g1592 1114 SMART LRR_typ_2 642 665 IPR003591 -
Sto3g1592 1114 SMART LRR_typ_2 110 134 IPR003591 -
Sto3g1592 1114 SMART LRR_typ_2 157 185 IPR003591 -
Sto3g1592 1114 SMART LRR_typ_2 446 470 IPR003591 -
Sto3g1592 1114 SMART LRR_typ_2 301 325 IPR003591 -
Sto3g1592 1114 SMART LRR_typ_2 422 445 IPR003591 -
Sto3g1592 1114 SUPERFAMILY L domain-like 60 272 - -
Sto3g1592 1114 PRINTS Leucine-rich repeat signature 113 126 - -
Sto3g1592 1114 PRINTS Leucine-rich repeat signature 157 170 - -
Sto3g1592 1114 Pfam Protein kinase domain 822 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1592 1114 Gene3D Ribonuclease Inhibitor 423 510 IPR032675 -
Sto3g1592 1114 Gene3D Transferase(Phosphotransferase) domain 1 901 1112 - -
Sto3g1592 1114 ProSiteProfiles Protein kinase domain profile. 821 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1592 1114 Gene3D Ribonuclease Inhibitor 568 711 IPR032675 -
Sto3g1592 1114 CDD STKc_IRAK 827 1105 - -
Sto3g1592 1114 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Sto3g1592 1114 ProSiteProfiles Leucine-rich repeat profile. 136 158 IPR001611 GO:0005515
Sto3g1592 1114 SUPERFAMILY L domain-like 577 690 - -
Sto3g1592 1114 Gene3D Phosphorylase Kinase; domain 1 784 900 - -
Sto3g1592 1114 Pfam Leucine Rich Repeat 185 207 IPR001611 GO:0005515
Sto3g1592 1114 Pfam Leucine rich repeat 425 483 IPR001611 GO:0005515
Sto3g1592 1114 Pfam Leucine rich repeat 255 313 IPR001611 GO:0005515
Sto3g1592 1114 Gene3D Ribonuclease Inhibitor 253 343 IPR032675 -
Sto3g1592 1114 Gene3D Ribonuclease Inhibitor 344 422 IPR032675 -
Sto3g1592 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 943 955 IPR008271 GO:0004672|GO:0006468
Sto3g1592 1114 ProSitePatterns Protein kinases ATP-binding region signature. 827 850 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1592 Sto-Chr3 11881185 11884733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1592 7 1105 Receptor kinase-like Gene Family AT1G55610 31.789 4.71e-149 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Sto3g1592 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1592 - - gmx:100783886 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1592 3 11881185 11884733 Sto3g1592 3 11881185 11884733 ECH