Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1561 atgGCCACCGTCACCACCCAGGCTTCCGCCGCCGTCCTCCGCCCATGCACCCCCAAGTCCCGGTTCCTCACCGGCTCCTCCGGTGGTAAACTCCACCGTGAGGTCACCTTCAGACCGTTCACCACTCCCTCCCCTGCCTCCTTCAAGGTCAACGCCAAGAAGGGAGAATGGCTCCCAGGGTTAGCCTCACCGACCTACCTCAACGGAAGTCTTCCAGGTGACAATGGGTTCGACCCTCTGGGGCTAGCGGAGGACCCAGAGAACCTGAGGTGGTTCGTGCAGGCTGAGCTGGTGAACGGGAGGTGGGCGATGTTGGGTGTGGCCGGAATGCTTCTTCCTGAGGTGTTCACGAAGATCGGGATCCTCAATGTGCCGAAATGGTACGATGCTGGAAAAGAAGAGTACTTCGCGTCGTCTTCCACTCTGTTCGTGATCGAGTTCATCTTGTTCCATTACGTGGAGATCAGAAGATGGCAGGACATTAAGAACCCTGGTTGCGTCAACCAGGACCCCATCTTTAAGCAATATAGCTTGCCTCCCCATGAGTGTGGCTACCCTGGTGGCATCTTTAACCCTCTCAATTTTGCACCCACTCTTGAGGCTAAAGAGAAGGAGCTTGCCAATGggAGATTGGCGATGTTGGCATTTTTGGGGTTTGTGATTCAACACAATGTGACTGGGAAAGGACCATTTGATAACCTGTTGCAGCATCTGTCAGACCCATGGCACAACACTATTATTCAGACACTGAGTGGCAACTAA 762 0.5381 MATVTTQASAAVLRPCTPKSRFLTGSSGGKLHREVTFRPFTTPSPASFKVNAKKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGILNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPHECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHLSDPWHNTIIQTLSGN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1561 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 253 - -
Sto3g1561 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 253 IPR001344 GO:0009765|GO:0016020
Sto3g1561 253 SUPERFAMILY Chlorophyll a-b binding protein 53 250 - -
Sto3g1561 253 Pfam Chlorophyll A-B binding protein 64 223 IPR022796 -
Sto3g1561 253 Gene3D Chlorophyll a/b binding protein domain 64 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1561 Sto-Chr3 11560810 11562414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1561 57 251 Chloroplast and Mitochondria Gene Families AT3G61470 54.726 6.05e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1561 K08910 - gmx:100802922 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1561 3 11560810 11562414 Sto3g1561 3 11560810 11562414 ECH