Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1555 ATGTCTTCGTCACATTTCGAAGGACTAGTTGGCATTCATCGTCACGTCGAGAAAATCGAAGGGTTTTTGTCGGAGGTCCGTACCGTGGGAATATGGGGAATGGGCGGTATAGGTAAGACCACACTTGCCAGAGTTGTATTTCACAAGTTAAAAGAACAATTTGAATCATTCTCCATGATTGAAAACGCAAGAGAACAGCTCTCAAGAATTGGATTGGAGGCACTAGGAGAGAAATTCCTCAGAGAACTATTGAAACACCAAGAGATTGACACATACAGGCCTTCACAAGTGCATATTTGTGAAGAAGGTCTAGATAATCTTCCTGAGGAATTAAGGATTCTCTATTGGGCAGAATACCCTTCGTCATGTGTGCCATTGAAGTTTTGTGCAGAAAATCTTGTTAATCTTAAAATGCCTAATAGTCATCTCCAACAACTTTGGGATGGAAATCAGCATTTCCCAAATTTAAAGACAATTGATCTCAAAAACTCAACCCACCTCACCAAACTCCCAGATCTGTGTCAGTGCCCAAACATTGAAGAAATAGACATGGATGGATGCACAAAATTGTCTCAGATTCATTCTTCATCTGTCTTACCCAAGCTTCTAATCATAAAGGTAAACCATTGCAAGAAGTTGAGATTTTTGAACATTGGCTGCAACATTATTCATGGACTGGCCTCAAGATTATCTGCTCTGAAAGCTGTCTACTATTTCCATGATCACATCAACTCATCATTCAATAAAGTGAGTGTGAATGTGTTCATATCTGCCCCTGATGGCAACATCTCTGGGTTTCGATACAAAGTTGCTTCATCACCATTAACAGAGGTAACACAGCACGTGGGGATCATCAAGAGTTCAAAGTTGAAACTTTTCACAGACAGTATGCCCTCTCTGCTTCCGTTTGTCAGCAAAATCGGTTGGTTTGATGATAACAGCTCAAGTAATCATTCCAAGTTTGGGAATTTTAAGAAAGATTGTTACTTTTTATCCCACAGTGGTGATCATGGGGTTAACTATGGGCAAATCAAAGAGGAATTCAATACTCCCACAATGCAAAAGAGACGAATGAGTTTCGATATGCCAATCCGCCCTCAAAAGCCGGCCGAAGAATCGAGCTCCTTAAATACTCCACTGAGCATCTCGCCCTATCAGATGTGGGATTCGGAGGAGGAGGTGGAGAAGAGGTGCATTAATGTTAATACTAATGATGGATTGATGTTGAGAGTTCCCAAGAGTATTATCCGTTGGTGTTTGTTAACACAAGTGAGATTGAAGAAGAGTGATATTTTCGTTGGGAGTGAAGAAGGTTGGAGTTTGGAATCAATTGCAGAATCTAATTGGATACCTTTTGATCCTATTTTAGATGTTTTGTTCTCACTGGATGATCAAGAAAGAGCATATAGTAGTTGTAGTAGTAGTGGTGATGCAGCCAAGCCTTTCCATATCTTGCATTCACAGCTTGTGGGAGGACTTGGACCCACCCAAGCTTATTCAGCCTATACTGGTTTTTCCATTATCTTTCTTCTTGATTTtgatttcatttcaattttggGATATCAAAGAAAAGTCTGCTTGATATCAGCTTCACATTTTGAATAA 1605 0.3969 MSSSHFEGLVGIHRHVEKIEGFLSEVRTVGIWGMGGIGKTTLARVVFHKLKEQFESFSMIENAREQLSRIGLEALGEKFLRELLKHQEIDTYRPSQVHICEEGLDNLPEELRILYWAEYPSSCVPLKFCAENLVNLKMPNSHLQQLWDGNQHFPNLKTIDLKNSTHLTKLPDLCQCPNIEEIDMDGCTKLSQIHSSSVLPKLLIIKVNHCKKLRFLNIGCNIIHGLASRLSALKAVYYFHDHINSSFNKVSVNVFISAPDGNISGFRYKVASSPLTEVTQHVGIIKSSKLKLFTDSMPSLLPFVSKIGWFDDNSSSNHSKFGNFKKDCYFLSHSGDHGVNYGQIKEEFNTPTMQKRRMSFDMPIRPQKPAEESSSLNTPLSISPYQMWDSEEEVEKRCINVNTNDGLMLRVPKSIIRWCLLTQVRLKKSDIFVGSEEGWSLESIAESNWIPFDPILDVLFSLDDQERAYSSCSSSGDAAKPFHILHSQLVGGLGPTQAYSAYTGFSIIFLLDFDFISILGYQRKVCLISASHFE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1555 534 Pfam NB-ARC domain 14 60 IPR002182 GO:0043531
Sto3g1555 534 Pfam Leucine Rich Repeat 132 151 IPR011713 -
Sto3g1555 534 SUPERFAMILY L domain-like 82 237 - -
Sto3g1555 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 92 IPR027417 -
Sto3g1555 534 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 6 90 - -
Sto3g1555 534 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 84 216 - -
Sto3g1555 534 Gene3D - 5 114 IPR027417 -
Sto3g1555 534 Gene3D Ribonuclease Inhibitor 118 293 IPR032675 -
Sto3g1555 534 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 90 IPR044974 GO:0006952
Sto3g1555 534 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 84 216 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1555 Sto-Chr3 11520959 11525876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1555 10 82 WRKY Transcription Factor Family AT5G45050 38.462 2.10e-09 58.5