Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1536 atgGAGATTGATAATGGATTTGTGGATGCCACGCGCTTAGGAAAATTTAAGGAAGTGAAAGCAACAGCAGCGTGTCCCATTGATACGTGCAAAAGGCCACTCAATCAGGATCCGGCTGCGATGGTTCAGGAAGTCGATAGGTTAGAAGAAACGTCAAAAAACAGATCTTGTCGTGGTAAAAAGAACCAAGCAAAAGTTCCTAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGCGAGCATTTGAATGATCTCTTTCTTGATCTAGCCAACGCTATTGAACTAAATCAGCAAAACAATGGAAAGGCGTCCATATTAAACGAAGCCACTAGGCTGCTAAAGGACCTGCTTGGTCAGATTGAGTCCCTTAAGAAGGAGAATGTGTCTCTGCTGTCTGAATCACGTTATGTGAGCATGGAGAAAAATGAGCTGGAAGAGGAAAACTCTGCTCTAGAGGTTCAAATTGAGAAACTCCAAGGTGAGATAGAAGCAAGAGTAGCACAATCTAAACCTGACCTTAATGTACCTCTTCCTTTGGAAATGGAGCCGCCAGTACAAACATCAAATTTTCCTGGAGAATGTGTCCATTTGCCTACTGTTGATCCTACAATGCAGCAAGGACCTCCCACTGTCTTAGTTGTTCCCTTTCGTCCTCATCATCTTCAACCTGCTTTTCCAACTTCTAATGGTGCCGAGCTCAACTCCAAACCTACCTCAGTCATCAGTAAACCACACGCTAGGTATCCCACCCCTGCAGATTCGTGGCCATCAAAACTGCTTGGAGAGCAACCAACTTCTGGTTAA 807 0.4399 MEIDNGFVDATRLGKFKEVKATAACPIDTCKRPLNQDPAAMVQEVDRLEETSKNRSCRGKKNQAKVPKRIHKAEREKMKREHLNDLFLDLANAIELNQQNNGKASILNEATRLLKDLLGQIESLKKENVSLLSESRYVSMEKNELEEENSALEVQIEKLQGEIEARVAQSKPDLNVPLPLEMEPPVQTSNFPGECVHLPTVDPTMQQGPPTVLVVPFRPHHLQPAFPTSNGAELNSKPTSVISKPHARYPTPADSWPSKLLGEQPTSG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1536 268 Gene3D - 63 143 IPR036638 GO:0046983
Sto3g1536 268 Coils Coil 107 134 - -
Sto3g1536 268 MobiDBLite consensus disorder prediction 225 268 - -
Sto3g1536 268 MobiDBLite consensus disorder prediction 228 242 - -
Sto3g1536 268 Pfam Helix-loop-helix DNA-binding domain 68 117 IPR011598 GO:0046983
Sto3g1536 268 PANTHER TRANSCRIPTION FACTOR BHLH47 38 266 - -
Sto3g1536 268 PANTHER TRANSCRIPTION FACTOR BHLH47 38 266 - -
Sto3g1536 268 Coils Coil 142 169 - -
Sto3g1536 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 117 IPR011598 GO:0046983
Sto3g1536 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 131 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1536 57 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 52.632 1.85e-62 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1536 - - mtr:MTR_4g108360 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1536 3 11358866 11362587 Sto3g1536 3 11358866 11362587 ECH