Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1521 ATGGCGGATTCTTCGTCTTCCAGCTTCTGGACTCAGGCTAAtgctctccttcggaagaattTGACCTTCCAGAAAAGGCATGTGAAGACGAATGTTCGGCTCATCTTATTCCCATTTCTCCTCTGTGTGTTGCTTGTTGTCCTGCAAAAGTTAATTAACAATGAATTGGATAAGTCTGACAATAAGTGTGGGTGCATTTGTAAGAGGGAAGAAGGCGGTCGGTGTCAGGAGCAAGTCTGTGGGATTCAGTATTCGGATTTGGATCAAGTTAGCACTTGCGCAATTCCTAATCCTCCAGAATGGCCTCCGTTATTGCAAGTGCCTGCTCCCCAGTATCGAGCTGTACAAAGTGATATTATTCCATTTTCTGATTTGCCAGATAATTCCTGCAGGAGGACGGGGTCTTGCCCTGTGACTTTTCTCTTCACTGGCCATAATCAGTCTTTTGGAGAAAGTATGTTTGTCTTTCTCTGTGTTTTTACATATTATCTTACTTATTATTGTGTAAACACTGTCGCTGGTGCAACTATCAAAATCCAGGGATCAGAATCAAAGACTGAATACACCAATTTTCTTGAACCTGCTTTCTTTTCGGGTCTTCCCATTTATTATCTGCAAACTCAGTGCCCAAGTAACTCTACATTCTCTGTTCCGATCCAGATATTAACCACTAATATGCAGCAAGAGGTTAGATGTGCTCAAGGTTTACATTTATGGCGTAGTAGTTCTTCTGAGGTAAACAATGAGCTATATAAAGGTTATCGAAGAGGGAACACAGAGAGACAGATTAATGAGATAGTTGCAGCCTATGATTTTCTGAATACAAATGAGAATAGATTTAATGTCAACATTTGGTACAACGCAACCTACAAGAATGACTCGGGCTTTGATTCTATTGCACTGGCGCGAATTCCCCGTTCTGTGAATCTGGTGTCAAATTCCTACCTTCAGTTTCTGCAGGGGCCAGGTACTGAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAGCCTGAGACCCAAGTTAAGCTTGATGTGGCTTCTCTTCTGGGTACTCTTTTCTTCACATGGGTTGTGCTGCAACTGTTCCCTGTTGTTTTGACATCACTGGTATATGAGAAGCAACAGAGACTAAGAATAATGATGAAAATGCACGGTCTTGGTGATGGGCCATATTGGCTGATCTCCTATGGTTATTTTCTTTCCATATCAGTAACCTACATGCTATGTTTTGTCATATTCGGCTCAGTCATAGGGTTAAAATTCTTTACCTTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAACTTGCAAATTGCACTGGCATTTCTTGTGGCTGCAATGTTTTCAAATGTTAAGACAGCTACAGTAATTGGATATATTGGTGTATTTGGAAGTGGACTTTTAGGTGGCtttcttttccaattttttgTTGAAGACACATCATTTCCAAGAGGGTGGATAATTGTTTTGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGACTATATGAGTTTGCACAGTATTCCTTCACTGGGGATACTTTGGGAACTGACGGGATGAGGTGGGGAGATCTGAATGATAGCACGAATGGAATGAAAGACGTCTTAATTATCATGCTTGTTGAGTGGTTTTTGGTGATTTTTGTTGCTTATTACATCGATAAAGTATTGTCATCAGGAAGTGGCAAAAGTcctctttttttcttgaaaagatTTCAGAAAAAGCCTAAATCATCTTTCCGGAAGCCAAGTATCCAAAGGCAGGACTCTAAAGTTTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAAAAGGTAGAGCAGCTGCTACTTGAACCAACTATTAATCATGCAATTGTATGTGACAACCTAAAGAAGGTATATCCTGGGAGGGACGGAAACCCAGAGAAATTTGCGGTGAGAGGCTTGTCTCTTGCTCTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACCTCATTTATCAATATGATGATTGGTCTCACGAAGCCATCCTCTGGTACTGCATTTGTTCAAGGTCTGGACATAACAACAAATATGGATGGAATATATACTAGCATGGGCGTATGCCCACAGCATGACTTGTTGTGGGAAACTCTAACCGGAAGAGAGCACCTACTCTTCTATGGAAGACTTAAAAATCTTAAAGGCTCAGCCTTAACCCAAGCTGTGGAAGAATCTCTGAAAAGTGTAAACCTTTTTCATGGCGGAGTGGCTGATAGACAAGCTGGAAAGTACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCCAGAGTTGTTTATATGGATGAACCAAGTACTGGGTTAGACCCTGCGTCAAGAAACAACTTGTGGAAAGTTATCAAGCAAGCAAAGCAGAATCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCGGAGGTCTTATGTGATCGACTCGGAATATTTGTAGACGGGAGTTTGCAGTGCATAGGAAATCCAAaggagCTAAAAGGCAGATATGGTGGAAGCTACGTGTTCACGATGACAACATCTGTGGACCATGAGAATGAAGTGGAGAACTTGGTTCATAAGCTGTCCCCAAATTCCAGCAAGATATACCATATCTCTGGTACCCAGAAATTTGAGCTTCCTAAGGGAGACATTAGAATTGCAGATGTTTTCCGAGCTGTTGACACTGCAAAGAGAAACTTCACAGTTTTCGCATGGGGTTTAGCAGATACTACATTGGAAGATGTCTTCATTAAGGTTGCACGTGGGGCTCAAGCATTCAACACCTTGTCATAA 2844 0.4075 MADSSSSSFWTQANALLRKNLTFQKRHVKTNVRLILFPFLLCVLLVVLQKLINNELDKSDNKCGCICKREEGGRCQEQVCGIQYSDLDQVSTCAIPNPPEWPPLLQVPAPQYRAVQSDIIPFSDLPDNSCRRTGSCPVTFLFTGHNQSFGESMFVFLCVFTYYLTYYCVNTVAGATIKIQGSESKTEYTNFLEPAFFSGLPIYYLQTQCPSNSTFSVPIQILTTNMQQEVRCAQGLHLWRSSSSEVNNELYKGYRRGNTERQINEIVAAYDFLNTNENRFNVNIWYNATYKNDSGFDSIALARIPRSVNLVSNSYLQFLQGPGTEMLFEFVKEMPKPETQVKLDVASLLGTLFFTWVVLQLFPVVLTSLVYEKQQRLRIMMKMHGLGDGPYWLISYGYFLSISVTYMLCFVIFGSVIGLKFFTLNDYSIQFVFYFIYINLQIALAFLVAAMFSNVKTATVIGYIGVFGSGLLGGFLFQFFVEDTSFPRGWIIVLELYPGFALYRGLYEFAQYSFTGDTLGTDGMRWGDLNDSTNGMKDVLIIMLVEWFLVIFVAYYIDKVLSSGSGKSPLFFLKRFQKKPKSSFRKPSIQRQDSKVFVQMEKPDVSQEREKVEQLLLEPTINHAIVCDNLKKVYPGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPSSGTAFVQGLDITTNMDGIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADRQAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWKVIKQAKQNRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKGRYGGSYVFTMTTSVDHENEVENLVHKLSPNSSKIYHISGTQKFELPKGDIRIADVFRAVDTAKRNFTVFAWGLADTTLEDVFIKVARGAQAFNTLS 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1521 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 853 IPR027417 -
Sto3g1521 947 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 947 IPR026082 GO:0016021|GO:0055085|GO:0140359
Sto3g1521 947 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 947 - -
Sto3g1521 947 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 862 IPR003439 GO:0005524
Sto3g1521 947 CDD ABC_subfamily_A 629 850 - -
Sto3g1521 947 SMART AAA_5 655 838 IPR003593 -
Sto3g1521 947 Pfam ABC-2 family transporter protein 276 551 - -
Sto3g1521 947 Pfam ABC transporter 647 791 IPR003439 GO:0005524
Sto3g1521 947 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524
Sto3g1521 947 Gene3D - 617 887 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1521 Sto-Chr3 11242796 11250897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1521 601 873 Calmodulin-binding Proteins AT2G36910 22.727 3.24e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1521 - - gmx:100805474 1533.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1521 3 11242796 11250897 Sto3g1521 3 11242796 11250897 ECH