Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1520 ATGATGGAGGTTACTGTAACCACCTCGTGCTGGTGGCAGTTACAAAAAAGGCATCGTTGGTCTTTCACTCTTATCCTCTTAACTCCATTTGTCCCACGTTACTCTCCTGCCACCGTGGCTTTTCCTCTACCAACCCCACCTCCTCCTACCACTCCCAATACTCCCCCACTCACTCGACCCACCCGTGCCCCCCACGCGTTCCCATCCACGGCTCCCGTCAACCACCACGCGCCTCTGCGCGTAGGATCCCGTTCACGATTCAAGGCCCTAAAGAGTAATTTCACAATGCTTTCGAATCAAAAAGCTGGAAACACTTGGTTCCGAAgTCCAGATCTTGTAATGGGAAAGTCACCCGGAAAATGGATCAAAACGGTGCTATTTGGGAAAAAGTCATCCAAATCCAATATTTCAAAAGGAAGTgagAAACTTTCTAAGCAGAAAGAAACATATGTTGCTTCAAAGGCGTTGGAGACTGCTGCTTTGTCTTTAGATCCAACTCCCAATACTCTTGCCGGAAATGGGGTGCATCTAGAACTGGAAAATAAAGAACCGGAAGAAAATCTTTTACCTCTGAATCAAGAAACAGATATTGTGGGATCCGATCATCAAGATGCACCACTTGTTCCAGAGAAAATTGAGCGGGAGGAAGTTGCAACGGAAGATGCACCGCCCGATCCAGAGAAAACTATGCAAGAGGAAGCTGCGATGAAAGTGCAGGCTGCTCTAAGGGGTTTCATGGCTCGTAGGGCATTTAAGGCCCTTAAGGGCATAATAAGGTTGCAAGCACTTTTTCGCGGACACTTGGTTCGGAGACAGGCCGTTGCTACTTTATGTTGTATGTATGGGATTGTGAAGTTACAAGCTCTTGTTTGTGGACGAAGAGTTAGGCAATCTGATTTTCGGTTTGATATGCATGAGAAGCGCAATCTAGTGAAGCCTCTGGATGGCAAGCTTGTGTATCCAGATGGAACAAGTGCAACCAAAAAAATTGCAAATCTGTCGGCAAATAATTTTATCCGTAAACTTCTTGCTTCATCAACCACAATAATCGTTTTGCGCCTTGAATATGTTCACGGGGATCCAAATTCAGTCCCAAGTTGGTTGGAACGGTGGTCAGCATCGTGCTTCTGGAAACCAGTTCCCCAACCCAAGAAAGTTCTAGAAACTAAGTCTCAGAGAAAGCAGGGTAGTACTTCTTCTATTGGAGAAGCGCCAATGAGCAAGTCAAAACGAAGTAACCGGAGGATTCCTAGTGCAAATCTTGACTCGGTCTCAGTGCAAGCAAATCCTGAACTTGAGAAACCGAAACGAAATGTAAGGAAAGTTTTGAGCCACCCCACTGATCCAGTGCAGGAAAATCCACAGAGTGAGTTTGAAAAAGTTAAACGAAACTTGAGAAAGGTTCATAACCCCATTGTTGAGAATGCTATTCAGTCAGAAGTCGAATCGGAGACCCTAAAGCAGCAATCAGAAAAGGCATCAGTTACCTCAGGTCATAGTGTCTCACTAGAAGGGGTCAAAAGTTCCAATGAGAAGATAAAAGAGGAAGCCACGTTGACCACGTCCGATGTGCCTGATCTAGAAGTTACTCCAATAATTTCAGTTAGCAATGAGGCATCCGAAATGCCAAGAAATTGTCAAGTGCCCTTCAATTCTGAGCCATTAAGAGAGAATACAAGTAGAGATAGAAGCATTTCTGGCGAAGAACCTATAAGCGAGCCAAAAGATCTACTAAAGAGTTTTTGTAATGATGAAAACTTGCCTTTAACAAATGGACATTTGAGTCTTCAGGAAGATTCAGCCGGAAATGAAAACCAGAAACCGACTCAAAAATCATCATTCCCGGGAAAGCAGGAAATTGTAGAGGATGGTATTGGTCTAAGGAATAGTCCGAAGTTACCAAGCTATATGGCAGCAACTGAATCTGCAAAGGCGAAGTTGAGAGCACAAGGGTCCCCAAGGCTTGCACAAGATGGAGGTGAGAGAAGCAACAACTCTCGGCGACATTCTCTCCCATCTTCAACTAATAGTAAAATTAGTTCGCATTCACCAAGGATGCAGAAACCGGGTCAAGCAGGTGGCAAAGGGGGGCACAAAAGTGACAAAACTACGTCTTCTAGAGATGGGAATGAAATGGGCGCTTTAAAATTTAAGGAGTTCAAGAAATGTAAGGATGGAAAAGAGTTGAAAGTTGATACAAGCAGAGTGGAGGAGGTGATTTCAAAGAACACTGGTTTTCAGGAGTTTAACACGGGAAGATGA 2262 0.4439 MMEVTVTTSCWWQLQKRHRWSFTLILLTPFVPRYSPATVAFPLPTPPPPTTPNTPPLTRPTRAPHAFPSTAPVNHHAPLRVGSRSRFKALKSNFTMLSNQKAGNTWFRSPDLVMGKSPGKWIKTVLFGKKSSKSNISKGSEKLSKQKETYVASKALETAALSLDPTPNTLAGNGVHLELENKEPEENLLPLNQETDIVGSDHQDAPLVPEKIEREEVATEDAPPDPEKTMQEEAAMKVQAALRGFMARRAFKALKGIIRLQALFRGHLVRRQAVATLCCMYGIVKLQALVCGRRVRQSDFRFDMHEKRNLVKPLDGKLVYPDGTSATKKIANLSANNFIRKLLASSTTIIVLRLEYVHGDPNSVPSWLERWSASCFWKPVPQPKKVLETKSQRKQGSTSSIGEAPMSKSKRSNRRIPSANLDSVSVQANPELEKPKRNVRKVLSHPTDPVQENPQSEFEKVKRNLRKVHNPIVENAIQSEVESETLKQQSEKASVTSGHSVSLEGVKSSNEKIKEEATLTTSDVPDLEVTPIISVSNEASEMPRNCQVPFNSEPLRENTSRDRSISGEEPISEPKDLLKSFCNDENLPLTNGHLSLQEDSAGNENQKPTQKSSFPGKQEIVEDGIGLRNSPKLPSYMAATESAKAKLRAQGSPRLAQDGGERSNNSRRHSLPSSTNSKISSHSPRMQKPGQAGGKGGHKSDKTTSSRDGNEMGALKFKEFKKCKDGKELKVDTSRVEEVISKNTGFQEFNTGR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1520 753 ProSiteProfiles IQ motif profile. 255 277 IPR000048 GO:0005515
Sto3g1520 753 MobiDBLite consensus disorder prediction 489 509 - -
Sto3g1520 753 MobiDBLite consensus disorder prediction 489 507 - -
Sto3g1520 753 MobiDBLite consensus disorder prediction 589 616 - -
Sto3g1520 753 Pfam IQ calmodulin-binding motif 255 272 IPR000048 GO:0005515
Sto3g1520 753 Pfam IQ calmodulin-binding motif 233 252 IPR000048 GO:0005515
Sto3g1520 753 MobiDBLite consensus disorder prediction 540 555 - -
Sto3g1520 753 Gene3D - 227 277 - -
Sto3g1520 753 MobiDBLite consensus disorder prediction 392 427 - -
Sto3g1520 753 MobiDBLite consensus disorder prediction 700 716 - -
Sto3g1520 753 PANTHER IQ-DOMAIN 5-RELATED 114 707 - -
Sto3g1520 753 SMART iq_5 230 252 IPR000048 GO:0005515
Sto3g1520 753 SMART iq_5 253 274 IPR000048 GO:0005515
Sto3g1520 753 MobiDBLite consensus disorder prediction 540 573 - -
Sto3g1520 753 MobiDBLite consensus disorder prediction 589 716 - -
Sto3g1520 753 PANTHER PROTEIN IQ-DOMAIN 31 114 707 - -
Sto3g1520 753 MobiDBLite consensus disorder prediction 386 458 - -
Sto3g1520 753 Pfam Protein of unknown function (DUF4005) 627 700 IPR025064 -
Sto3g1520 753 MobiDBLite consensus disorder prediction 556 573 - -
Sto3g1520 753 ProSiteProfiles IQ motif profile. 231 259 IPR000048 GO:0005515
Sto3g1520 753 MobiDBLite consensus disorder prediction 666 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1520 Sto-Chr3 11226707 11234334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1520 114 710 IQD Protein Family AT1G74690 42.950 1.92e-113 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1520 - - gmx:100794636 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1520 3 11226707 11234334 Sto12g0879 12 5502432 5506167 ECH
Sto11g0985 11 10219694 10222833 Sto3g1520 3 11226707 11234334 ECH
Sto3g1520 3 11226707 11234334 Sto3g1520 3 11226707 11234334 ECH