Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1514 ATGAATTTGCAGCGAGGTTTCCCGCTGCTCCTGCAACAATACACGGCGCTTTTGAAGAAGAATTTCTTGCTCTCATGGCGGAACAAGAGGGCTTCGCTGCTCCAACTCTTGTCGCCTCTCTTCTTCATGTTCCTCATATTCGCCATTGATAGGGCGATTCAGGCCCGCTACTCCACCACTACGTCCGACAAGAGCGTCGCCGATCCTCCGCCGCTGCCGTCGCCTCCGATCACTCCCTGCGAGGAGAAGTTCTTCGTTAAGCTTCCTTGCTATGACTTTGTTTGGAGCGGGAATGCGAATCCTGCGTTTCAGACCATTGTTAATCGCATCATGGCTAACAATCCTGGCCGGCCAATACCGTCTAATAAGGTTTTGTCCTTTAGTAATGCAACAGAAGTGGATGACTGGCTTTTCAAGAATCCTATGCATTGTCCAGGGGCTTTACACTTCAGCCAAAAGAATACGACTGTCATAGGCTATGGTGTACAGACAAATTCAACGAGTGTCGCAAGGCGAGGGCATTATGAAGACCCCACGATGGCATTTCAGCTCCCACTTCAGCTTGCTGCAGAGCGTGAAATTGCTAGATATCTGATTGGAGTCCCAAACTTCAGCTGGAGTGTTTTTCTCTTGGAATTTGCTCACCCTGCTTCGGAAATTTTCTCTACACTGGGTTCAATAGGCCCATCATTTTTCCTTGCAATTGCAATGTTTAACTTTGTTCTTCAGATGAGCTCTTTAGTCACAGAAAAAGAGAATAAACTTCGTCAGGCGATGACGATGATGGGCCTTTATGATTCTGCTTATTGGTTATCCTGGCTCACCTGGGAAGCAGTTGTCACACTTCTGTCGTCACTCCTCATAGTTCTTTTTGGAATGAtgtttcaatttgatttttttctgaaaaacaGTTTTGGGATCCTGTTTTTTGTGTTCTTCCTTTTTGAACTCAACATGACTGGATTTGCCTTCATGATATCTGCTTTCATTAGTAAATCATCTTCAGCCACAACAGCGGGATTCTCCATATTTATTGTTGGCTTTGTGACTCAGGCATGGATCTTTTCGGGATTTCCCTATAAGGAAAGCATCTCGAAGAGTCTCCGAACTGTCTGGTCTTTATTCCCTCCAAATCCTTTTGCTCAAGCTCTACATGTGCTATCACAGGCAACATCCACTCCTGAAGATGATGGTCTTAGCTGGAGTAAAAGGGGAGAATGTGCTCCAGATGACGATAATTGTGTTTTAACAATTAATGATATTTATATGTGGCTGGTGGCTACATTTTTTGTGTGGTTTATTTTGGCTATCTACTTTGATAACATAATCCCAAATGCATCTGGTGTGAGGAAATCAGTCTTATACTTCCTAAAGCCCAGTTATTGGATGGGAAAAGGAGGAGGCAAAGTGAGAGAGGGTGGGGTTTGTAGTTGCATGGGTTCAGTCCCACCTCAAGAGTATATTGCACCAGATGATGAAGATGTCCTTGAAGAGGAAAACATTGTAAAGCAGCAAACAAGAGACGGAGTGGTTGACCCAAATGTTGCTGTTCAGATACATGGCCTTACAAAGACATATCCTGGTGCATGGAACATTGGTTGCTGCTGTAAATGTAAAAGAACTACTTCTTACAGTGCTGTTAAGGGCTTGTGGGTGAACTTTGCAAAGGATCAATTGTTCTGTCTTCTGGGACCCAATGGAGCTGGAAAAACAACCGTTATTAATTGTTTGACAGGGATAACGCCACTAACTGGTGGAGATGCATTGATTTATGGAAATTCAATCAAAAGCTCCACTGGCATGTCAAACATTCGAAAGCTTATAGGTGTCTGTCCGCAGTTCGATATTCTATGGGATGCATTGTCTGGTCAAGAACACCTTGAACTCTTTGCTAGTATTAAAGGCCTATCCCCGGCTTCTATTAAATCGATTACTGAAAAGTCATTGGCAGAAGTGAGACTCACAGACGCAGCTAAAGTCAGAGCTGGAAGTTACAGTGGGGGAATGAAACGGCGTCTCAGTGTTGCGATTTCCCTGATTGGTGATCCTAAGTTAGTCATTATGGATGAACCGACAACTGGTATGGATCCAATAACAAGGAGGCATGTTTGGGACATAATTGAAAATGCGAAAAGAGGGCGTGCCATTGTCCTTACAACACACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGCAATCATGGCAAAGGGAAGACTTCGCTGCATTGGTACCTCAATCCGGTTGAAGTCACGCTTTGGTACTGGTTTTATAGCTAACATCAGTTTCCATGGAAACAAATTTGAACAAAGTCCTTCCAATGGAGATGCAATTTCTACTACAAATCATGAGAGTGTGAAACAATTCTTTAAGAATCATTTAGACGTTGCACCAAAAGAGGAGAGCAATGCCTATGTAACTTATGTGATTCCTCATGATAGAGAGGGTCTCTTAACGaaatttttttatgagcTCCAAGATAGACAGGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTTGCAACTCTCGAAGAGGTTTTCTTGAACATTGCAAAGCAAGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGAGCTTAACGATGCTGACCTTGACATCTGGGGAATCTGTTCAGATACCTATAGGAGCAAGATTTGTGGGGATTCCAGGGACTGAATCTGCAGAAAACCCCAGAGGGATTATGGTAGAAGTATATTGGGAACAAGATGATACTGGTGCTCTCTGCATTGCTGGACACTCGCGGGAAGTTCCAGTCCCTCCTGGTGTTGAACTTTCGGCTCCTCCGGCCTCAACAAACCGACGAAATCTTGGCCGGGGAGGACCAGTAGATGGGCTTGTGATTGATCCCAGTCAAGTTAGCACAGTCATTTTTCACTGA 2901 0.4374 MNLQRGFPLLLQQYTALLKKNFLLSWRNKRASLLQLLSPLFFMFLIFAIDRAIQARYSTTTSDKSVADPPPLPSPPITPCEEKFFVKLPCYDFVWSGNANPAFQTIVNRIMANNPGRPIPSNKVLSFSNATEVDDWLFKNPMHCPGALHFSQKNTTVIGYGVQTNSTSVARRGHYEDPTMAFQLPLQLAAEREIARYLIGVPNFSWSVFLLEFAHPASEIFSTLGSIGPSFFLAIAMFNFVLQMSSLVTEKENKLRQAMTMMGLYDSAYWLSWLTWEAVVTLLSSLLIVLFGMMFQFDFFLKNSFGILFFVFFLFELNMTGFAFMISAFISKSSSATTAGFSIFIVGFVTQAWIFSGFPYKESISKSLRTVWSLFPPNPFAQALHVLSQATSTPEDDGLSWSKRGECAPDDDNCVLTINDIYMWLVATFFVWFILAIYFDNIIPNASGVRKSVLYFLKPSYWMGKGGGKVREGGVCSCMGSVPPQEYIAPDDEDVLEEENIVKQQTRDGVVDPNVAVQIHGLTKTYPGAWNIGCCCKCKRTTSYSAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPLTGGDALIYGNSIKSSTGMSNIRKLIGVCPQFDILWDALSGQEHLELFASIKGLSPASIKSITEKSLAEVRLTDAAKVRAGSYSGGMKRRLSVAISLIGDPKLVIMDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSRFGTGFIANISFHGNKFEQSPSNGDAISTTNHESVKQFFKNHLDVAPKEESNAYVTYVIPHDREGLLTKFFYELQDRQEEFGISDIQLGLATLEEVFLNIAKQAELESAAAEGSLTMLTLTSGESVQIPIGARFVGIPGTESAENPRGIMVEVYWEQDDTGALCIAGHSREVPVPPGVELSAPPASTNRRNLGRGGPVDGLVIDPSQVSTVIFH 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1514 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 745 IPR027417 -
Sto3g1514 966 Gene3D - 505 773 IPR027417 -
Sto3g1514 966 Pfam ABC-2 family transporter protein 32 438 - -
Sto3g1514 966 PANTHER ABC TRANSPORTER A FAMILY MEMBER 9 8 935 - -
Sto3g1514 966 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 517 763 IPR003439 GO:0005524
Sto3g1514 966 CDD ABC_subfamily_A 517 751 - -
Sto3g1514 966 Pfam ABC transporter 550 692 IPR003439 GO:0005524
Sto3g1514 966 SMART AAA_5 556 740 IPR003593 -
Sto3g1514 966 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524
Sto3g1514 966 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 935 IPR026082 GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1514 Sto-Chr3 11176584 11183295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1514 560 762 Calmodulin-binding Proteins AT2G36910 24.413 4.30e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1514 - - gmx:100786538 1517.67