Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1503 ATGGACAAGCTCAGGAAGAAGACAGCTCCAGCAACAGTTCTCATGCTCTCTGGCATTTGCATGGTGAAGAACTCCATTATAGCAACAGCAGCAAAAGCTTCATTCAGACCTGAAAGCTGCCACAATCACCTTGGCCATATCTATAAAGATGCTTCCTTGAGGTTCCTTGTAAATATAAGTGTGGGAGCCAAGGACAAAGATGAGTGTGGAGAAGGCAAGACAAATAGTGGGAATGGCAAATCCCAAAGCCCAGCTGACATTGGTTTGGATATAGACAACTCCAGTGAGTGCCACAACAAGTGCAATGGTGAAGCACCAAAGGCAATATTGCAGGGCCTAATGCCTCCAGCTCCTAAAGATAACAATCCAAGACCTGCAAAGAGGATGCTAAGCTGCCACCCTTGGGGTTTCTGGCAACGGGGTGGATCATCACAGGCATGGGGTCTTAACTTATCTATACCTGCTAAGACTGTTTAccagaagagaagaaagagagccACATATGAGAGTCCTGAACCTTCCCAGAAAAGTATCAGAGACAAGAGCGCCTGCAATGGAAGCAACATTGGAGGTTCCATTCCAAATTTGAACCACATTAACCACGGCAATGTTACTCATGTTGTATTGGGTGAGCAGAGTTTGTTTTGTGGTAATCCAAGTCAAAATTTGGGTGAGGATTTTCATGGATATGGCAGTTTTTCTGTTAAGGGATGTGGCGGAGAAGTCAATATGATTCATCTCTGGTTTGTGGAAGAATTCCAAGTGCAAGATTTGAGATTCCTCTCCATAGATATTGAAACCAGAACTCCATTTGGAAGGCTTGAAGGGAAATTAATGGCTACTTTAGAATATTGGCTCTTCTTGCTGATTTCCACACTACTTTTCTTCTGCCCTTCCTTCTTTGCACTCACTCAAGATGGTCTTACGTTGTTGGAAATCAGAAGCACTTTGAATGACACTAGGAATCATCTTAGCAACTGGCAAGAGTCTGATGAATCTCCCTGCACATGGACCGGAGGGATTATATCTCCTAGCATTGGAAAACTCACCAGACTACAGAGACTGGCTCTTCATCAGAACAGCTTACATGGAATTATTCCTAATGAAATTACCAATTGTAGTGAGCTAAGAGCACTATACCTAAGGGCTAATTATTTCCAAGGAGGCATACCATCAGAAATTGGAAATCTTTCTTTTCTAACTATACTGGATTTATCGAGCAACTCATTGAAGGGGGCAATACCTTCTTCTCTCGGCCGTCTCTCACATTTGCAAGTTCTGAACTTGTCTACCAATTTTTTGTCTGGTGAAATCCCAGACATTGGAGTGCTAAGCATCTTCGGAAACAACTCGTTTACCGGCAATTTAGACCTTTGTGGCCGGCAAGTTCAAAAACCATGCCGGACCTCACTTGGTTTCCCGGTGGTGTTACCACATGCTGCAAGTGATGAACCTGCAGGCATGTCATATCTATACATCCCTACAAAAAGATCTTCACATTACATGAAGGGGGTGTTCATTGGAGCAATGTCCACAATGGGAATTTCACTTGTCATAATTCTCTCATTCCTCTGGATTTGTTTACTGTCAAAGAAGGAAAGAGCTGCTACAAATTACGTGGTAGTCAAGAAACAAGTTGATCCGGAATCAGGTAGAAAACTCATCACCTTTCATGGAGATCTGCCATACCCTTCAGCTGAGATCATAGAGAAGCTGGAGTCTCTTGATGAAGAGGACGTGGTAGGGTCGGGAGGGTTCGGTACCGTTTATCGAATGGTCATGAATGATTGTGGGACTTTCGCCGTGAAACGCATCGACCGAAGCCGGGAAGGATCTGATAAGGTTTTTGAAAGGGAACTGGAGATCTTGGGTAGCATCAAGCACATAAATTTAGTGAACCTGCGTGGTTACTGCAGAATCCCTTCTTCAAAGCTTCTTATCTATGATTATTTGGCTATGGGAAGCTTGGATGATCTCTTACATGATTCAGAAAATACTGAACATAAATTATTGAATTGGGGTGCTCGCTTGAAAATAGCCCTCGGTTCGGCCCGGGGGCTGGCATACTTACACCATGACTGCTGCCCGAAAATTGTACACCGTGACATAAAATCCAGCAACATCCTCCTGGACGAAAACTTGGAGCCTCGTGTCTCCGATTTCGGACTTGCGAAGCTTTTGGTCGATGAAGATGCTCATGTCACAACAGTAGTTGCTGGCACATTTGGCTATTTGGCTCCAGAGTATCTTCAAAGTGGGAGAGCAACTGAGAAATCTGATGTATACAGCTTTGGAGTTCTATTGCTTGAACTTGTAACCGGAAAGAGACCTACAGATCCTTCTTTTGTAAAGAGAGGTCTAAATGTTGTTGGCTGGATGAACACATTACTAAGAGAGAAGAGAATGGAAGAAGTGGTAGACAGAAGATGCCATGATGCAGATGCAGGAACAGTAGAAGTGATTATTGAGCTAGCAGCAAGATGCACAGATGCAAACCCGGACGATCGCCCATCGATGAGCCGGGTGTTACAGGTGTTGGAACAAGAGGTTATGTCTCCTTGCCCAAGTGACTTTTATGAGTCCCATTCAGATCACTGTTAG 2601 0.436 MDKLRKKTAPATVLMLSGICMVKNSIIATAAKASFRPESCHNHLGHIYKDASLRFLVNISVGAKDKDECGEGKTNSGNGKSQSPADIGLDIDNSSECHNKCNGEAPKAILQGLMPPAPKDNNPRPAKRMLSCHPWGFWQRGGSSQAWGLNLSIPAKTVYQKRRKRATYESPEPSQKSIRDKSACNGSNIGGSIPNLNHINHGNVTHVVLGEQSLFCGNPSQNLGEDFHGYGSFSVKGCGGEVNMIHLWFVEEFQVQDLRFLSIDIETRTPFGRLEGKLMATLEYWLFLLISTLLFFCPSFFALTQDGLTLLEIRSTLNDTRNHLSNWQESDESPCTWTGGIISPSIGKLTRLQRLALHQNSLHGIIPNEITNCSELRALYLRANYFQGGIPSEIGNLSFLTILDLSSNSLKGAIPSSLGRLSHLQVLNLSTNFLSGEIPDIGVLSIFGNNSFTGNLDLCGRQVQKPCRTSLGFPVVLPHAASDEPAGMSYLYIPTKRSSHYMKGVFIGAMSTMGISLVIILSFLWICLLSKKERAATNYVVVKKQVDPESGRKLITFHGDLPYPSAEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDKVFERELEILGSIKHINLVNLRGYCRIPSSKLLIYDYLAMGSLDDLLHDSENTEHKLLNWGARLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENLEPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLREKRMEEVVDRRCHDADAGTVEVIIELAARCTDANPDDRPSMSRVLQVLEQEVMSPCPSDFYESHSDHC 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1503 866 Pfam Protein kinase domain 577 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1503 866 Gene3D Ribonuclease Inhibitor 304 469 IPR032675 -
Sto3g1503 866 Gene3D Transferase(Phosphotransferase) domain 1 651 855 - -
Sto3g1503 866 MobiDBLite consensus disorder prediction 67 89 - -
Sto3g1503 866 SUPERFAMILY Protein kinase-like (PK-like) 560 847 IPR011009 -
Sto3g1503 866 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Sto3g1503 866 Pfam Leucine rich repeat N-terminal domain 305 339 IPR013210 -
Sto3g1503 866 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 334 858 - -
Sto3g1503 866 ProSiteProfiles Protein kinase domain profile. 575 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1503 866 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 334 858 - -
Sto3g1503 866 Gene3D Phosphorylase Kinase; domain 1 539 650 - -
Sto3g1503 866 MobiDBLite consensus disorder prediction 74 89 - -
Sto3g1503 866 MobiDBLite consensus disorder prediction 164 184 - -
Sto3g1503 866 SUPERFAMILY L domain-like 304 463 - -
Sto3g1503 866 SMART serkin_6 575 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1503 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1503 Sto-Chr3 11093258 11102857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1503 278 855 Receptor kinase-like Gene Family AT2G35620 48.915 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sto3g1503 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1503 - - tcc:18604589 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1503 3 11093258 11102857 Sto3g1503 3 11093258 11102857 ECH