Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1501 ATGGGGGAGAAGGCCGAAGTATTGGAGGCTGTTTTGAAGGAAGCTGTGGATTTGGAGAACATACCCATTGAGGAGGTGTTTGAGAATCTCAGATGTAGCAGAGAAGGTCTCACCTCTGAGGCTGCTGAGGAGAGACTGACTATTTTTGGCTACAATAAGCTTGAGGAGAAAAAGGAGAGCAAATTTTTGAAGTTCTTGGGATTTATGTGGAATCCTCTTTCTTGGGTTATGGAGGCTGCTGCCATAATGGCGATTGCTCTTGCCAATGGAGGAGGGAAGCCCCCTGACTGGCAAGACTTTGTGGGTATCATCACCTTGCTTCTCATCAATTCAACTATCAGTTTCATTGAGGAGAACAATGCGGGTAATGCTGCAGCGGCTCTGATGGCTCGTCTCGCCCCAAAAGCAAAGGTTCTTCGAGATGGCAGGTGGAGTGAACAAGATGCTTCTGTCCTGGTTCCTGGTGACATAGTCAGTATTAAACTTGGAGATATTATACCAGCTGATTCACGTCTACTTGAAGGTGATCCATTGAAAATTGATCAGTCTGCTCTTACTGGTGAGTCCTTGCCTGTTACTAAAGGACCTGGTGATGGTGTATATTCTGGTTCTACATGTAAACAAGGAGAGATTGAAGCTGTGGTCATTGCCACTGGCGTCCATACCTTCTTTGGAAAAGCTGCTCACCTCGTAGATACCACTAATCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCAATTGGGAACTTCTGCATATGCTCGATTGCTGTGGGGATGATCATTGAGATTATTGTCATGTATCCCATCCAAGACCGAGAATATCGCCCTGGAATTGATAACCTTCTTGTACTTCTTATTGGGGGAATTCCAATTGCCATGCCCACAGTTCTCTCTGTGACCATGGCCATTGGTTCTCATAGGTTATCCCAGCAGGGAGCTATCACAAAGAGGATGACAGCTATTGAAGAGATGGCAGGCATGGATGTACTTTGCAGTGATAAGACTGGAACTCTAACTTTGAACAAGCTTACTGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCAGATACTGTTGTTTTGATGGCAGCTCGAGCCTCAAGACTTGAAAATCAAGATGCAATAGATTCTGCCATAGTTGGGATGCTGGCTGACCCAAAGGAGGCACGTGCTGGCATTCAAGAAGTACATTTTCTTCCCTTCAATCCTACTGATAAGCGTACAGCATTAACTTATATTGACCGTGATGGTAAAATGCATAGAGTGAGCAAAGGTGCACCAGAGCAGATCCTTCATCTTGCACACAATAAGTCAGACATTGAACGTAGAGTTCATGCAGTGATAGATAAGTTTGCAGAGCGTGGTTTGCGATCTCTTGCTGTAGCATACCAGGAAGTTCCAGAAGGTACTAAAGAGAGTGCTGGAGGCCCATGGCAGTTTATTGGTCTTATGCCTCTCTTTGACCCACCTAGGCATGACAGTGCTGAAACAATACGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAGGAAAGGAAACAGGACGTCGCTTGGGAATGGGTACCAACATGTATCCTTCATCTGCTTTGCTTGGGCAGGACAAGGATGAATCTATTGCTGCTTTACCCATTGATGAACTGATAGAAAAAGCTGATGGATTTGCCGGTGTTTTTCCAGTTAGTTTGGCATGTAGTGGGTGGAacattatgtatttatttattttggtaatGAGTATTCTCatgttaataaatttatataatttgccAGAGCACAAATATGAGATTGTGAAACGCTTGCAAGCTAGGAAACATATATGTGGAATGACTGGTGATGGAGTGAATGATGCACCTGCTCTTAAAAAGGCAGACATTGGAATTGCTGTTGCTGATGCGACTGATGCAGCTCGTAGTGCATCTGATATTGTTTTAACTGAACCTGGTCTAAGTGTTATTATCAGTGCTGTTTTGACCAGCCGAGCTATCTTCCAGAGAATGAAAAATTATACAATTTATGCAGTCTCAATCACAATTCGTATTGTGCTTGGTTTTATGTTGCTGGCTCTCATATGGAAGTTCGACTTTCCACCTTTTATGGTTCTTATTATTGCCATTCTAAACGATGGTACTATTATGACAATTTCAAAAGATCGGGTAAAACCATCTCCTCTGCCAGATAGCTGGAAGCTAGCAGAGATATTTACTACTGGCATTGTGCTTGGTAGTTACTTGGCAATGATGACAGTCATTTTCTTTTGGGCAGCGTACAAAACAGATTTCTTCCCGAAAGTATTTGGGGTCTCGACTCTTGAAAAAACTGCTCATGATGATTTCCGGAAACTTGCATCAGCAATATATCTTCAAGTGAGCACTATTAGTCAGGCCCTTATATTTGTGACTCGGTCGCGAGGTTGGTCTTATGTTGAGCGTCCTGGTATACTGCTGGTGGCTGCTTTTTTGATTGCTCAGCTGATTGCCACTTTGATTGCAGTATATGCTAACTGGAGCTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTAATATGGTTATACAACATAATATTCTATATCCCGCTGGATATTATTAAGTTCTTAATTCGCTATGCTTTGAGTGGGAGGGCTTGGGATCTTGTCATCGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTCGGAAAGGAACAAAGGGAACTTCAATGGGCACATGCACAAAGAACATTGCATGGATTACAAGCACCTGACACCAAGATGTTCACCGAGCGCACACATTTCAATGAACTCAATCAAATGGCCGAAGAAGCTAAACGGAGAGCCGAAATTGCAAGGTTGAGAGAGCTGCATACACTAAAAGGTCATGTAGAATCAGTTGTGAGATTGAAGGGGCTTGACATAGAAACAATTCAGCAAGCATACACAGTGTGA 2961 0.4279 MGEKAEVLEAVLKEAVDLENIPIEEVFENLRCSREGLTSEAAEERLTIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWSEQDASVLVPGDIVSIKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPDTVVLMAARASRLENQDAIDSAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPVSLACSGWNIMYLFILVMSILMLINLYNLPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPKVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLVAAFLIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDIIKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1501 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 366 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1501 986 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 600 708 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1501 986 SUPERFAMILY HAD-like 327 667 IPR036412 -
Sto3g1501 986 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Sto3g1501 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Sto3g1501 986 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Sto3g1501 986 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Sto3g1501 986 Pfam haloacid dehalogenase-like hydrolase 327 634 - -
Sto3g1501 986 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1501 986 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1501 986 PRINTS H+-transporting ATPase (proton pump) signature 796 817 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1501 986 Gene3D - 343 490 IPR023299 GO:0000166
Sto3g1501 986 SFLD p-type atpase 313 671 IPR044492 -
Sto3g1501 986 Pfam E1-E2 ATPase 132 310 - -
Sto3g1501 986 Gene3D - 196 335 - -
Sto3g1501 986 Gene3D - 554 882 - -
Sto3g1501 986 Gene3D - 68 144 - -
Sto3g1501 986 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Sto3g1501 986 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Sto3g1501 986 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Sto3g1501 986 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Sto3g1501 986 PRINTS P-type cation-transporting ATPase superfamily signature 620 639 - -
Sto3g1501 986 PRINTS P-type cation-transporting ATPase superfamily signature 643 655 - -
Sto3g1501 986 PANTHER PLASMA MEMBRANE ATPASE 1 3 570 - -
Sto3g1501 986 PANTHER PLASMA MEMBRANE ATPASE 1 599 966 - -
Sto3g1501 986 CDD P-type_ATPase_H 36 877 IPR006534 GO:0008553|GO:0016021|GO:0120029
Sto3g1501 986 PANTHER CALCIUM-TRANSPORTING ATPASE 599 966 - -
Sto3g1501 986 PANTHER CALCIUM-TRANSPORTING ATPASE 3 570 - -
Sto3g1501 986 Coils Coil 937 957 - -
Sto3g1501 986 Gene3D - 935 986 - -
Sto3g1501 986 SFLD C1.7: P-type atpase like 313 671 - -
Sto3g1501 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 883 IPR023298 -
Sto3g1501 986 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 570 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1501 Sto-Chr3 11072393 11078578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1501 1 986 Primary Pumps ATPases AT5G62670 91.075 0.0 1800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1501 K01535 - cpap:110819640 1744.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1501 3 11072393 11078578 Sto12g0863 12 5416195 5421479 ECH
Sto3g1501 3 11072393 11078578 Sto3g1501 3 11072393 11078578 ECH