Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1499 ATGGGCATGGATTACTATAACATACTGAAAGTGAATCGAAATGCGAGTGACGAGGATTTGAAGAAGGCGTATAAGAGGCTAGCGATGATTTGGCACCCTGACAAGAATCCAGTTAATAAGAGGGAGGCTGAGGCCAAGTTCAAGCAAATTTCCGAGGCTTACGACGTTTTAAGCGATCCTCAGAAGCGTCAGATCTATGATCTTTACGGGGAGGAGGCCCTCAAGTCGGGCCAGTTCCCGCCTCCTCCGCAATCCTCCTCTTCTTCCATGTCCTCGTCTTCTCGTGCTTACCAGAATTTCCATCACCAGCAGCGCCAGCATACGACGTCGTCGTATCGGTTTAATCCCCGGGACGCCGATGACATTTACGCGGAAATTTTTGGGTCGGagaatggtggtggtggtggtggagttGGGAGAAATGGAGGGCAAAGGGATGGGTTTTTTAGGACGTCAAATGGCGCCGCGTTTGGTGGAGCTGGAAGGAAGGCTTCGGCGGTGGAGACTCTTTTGCCGTGTAGCTTGGAAGAGCTTTACAAAGGTgtcaagaagaagatgaagatctCAAGGAATGTCTGTGACGCTTTTGGCAAGTTTCGGAATGTGGAGGAGATATTGACCATCGAGATAAAACCCGGTTGGAAGAAAGGAACGAAAATCACTTTCCCCGAGAAGGGAAACCAGGAGCCCGGTGTCATTCCAGCTGATCTTATTTTTGTGGTGGATGAGAAACCACATGCTGTTTATAGGAGGGATGGTAATGATCTGGTGATCAACCAGGAAATAACTCTTCTGGAAGCCCTTACTGgtaaaaccctagacctcacTACCTTAGATGGAAGGAGTCTCATGATCCCACTAACAGATATAGTCAAACCCGGTGCTGAGGTTATTGTCCCTAATGAGGGAATGCCCATCTCAAAAGAGCCTGGAAAAAAGGGGAATTTGAGGATTAAGTTTGAAGTAAAGTACCCTTCAAGGCTAACCCCAGACCAGAAATCTGATCTGAGGAGAGTTTTGGGTGGAAATGGAATCTCAAATGTTTGA 1047 0.4479 MGMDYYNILKVNRNASDEDLKKAYKRLAMIWHPDKNPVNKREAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSSMSSSSRAYQNFHHQQRQHTTSSYRFNPRDADDIYAEIFGSENGGGGGGVGRNGGQRDGFFRTSNGAAFGGAGRKASAVETLLPCSLEELYKGVKKKMKISRNVCDAFGKFRNVEEILTIEIKPGWKKGTKITFPEKGNQEPGVIPADLIFVVDEKPHAVYRRDGNDLVINQEITLLEALTGKTLDLTTLDGRSLMIPLTDIVKPGAEVIVPNEGMPISKEPGKKGNLRIKFEVKYPSRLTPDQKSDLRRVLGGNGISNV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1499 348 Gene3D - 165 244 - -
Sto3g1499 348 Pfam DnaJ domain 4 67 IPR001623 -
Sto3g1499 348 CDD DnaJ 4 59 IPR001623 -
Sto3g1499 348 Gene3D DnaJ domain 2 137 IPR036869 -
Sto3g1499 348 SUPERFAMILY Chaperone J-domain 3 87 IPR036869 -
Sto3g1499 348 MobiDBLite consensus disorder prediction 79 114 - -
Sto3g1499 348 MobiDBLite consensus disorder prediction 74 114 - -
Sto3g1499 348 SUPERFAMILY HSP40/DnaJ peptide-binding domain 170 246 IPR008971 GO:0006457|GO:0051082
Sto3g1499 348 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 343 - -
Sto3g1499 348 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Sto3g1499 348 PRINTS DnaJ domain signature 6 24 IPR001623 -
Sto3g1499 348 PRINTS DnaJ domain signature 24 39 IPR001623 -
Sto3g1499 348 PRINTS DnaJ domain signature 42 62 IPR001623 -
Sto3g1499 348 PRINTS DnaJ domain signature 62 81 IPR001623 -
Sto3g1499 348 Pfam DnaJ C terminal domain 168 325 IPR002939 -
Sto3g1499 348 Gene3D - 246 326 - -
Sto3g1499 348 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Sto3g1499 348 SUPERFAMILY HSP40/DnaJ peptide-binding domain 249 334 IPR008971 GO:0006457|GO:0051082
Sto3g1499 348 SMART dnaj_3 3 62 IPR001623 -
Sto3g1499 348 PANTHER BNAA06G20720D PROTEIN 2 343 - -
Sto3g1499 348 CDD DnaJ_C 167 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1499 Sto-Chr3 11053548 11057276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1499 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 4.94e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1499 3 11053548 11057276 Sto3g1499 3 11053548 11057276 ECH