Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1482 ATGTCTCGCACGCTCTCCGCCACTCCTACCGGCGGCGATGGTTCCTCCGTCGCAGCCGGCGCCGGAGAGATCGTGCTGTTCGGAGTGAGAGTCGTAGTCGATTCCATGAGGAAGAGTGTGAGTATGAACAATCTCTCGCAGTACGAGCATCCGCAGGACGGTTCGAACAACACTAAAGAAGATGTTGTCGCTGCCGGTTACGCCTCCGCCGACGAGGCCGTCGTTCATGATTCTCGCAAGCATCGCGAGCGCGAGCGGAAACGAGGTGTTCCATGGACGGAGGAAGAGCATAAGCTGTTTTTGCTGGGATTGCAAAAGGTAGGCAAAGGTGATTGGAGAGGGATCTCCAAGAACTATGTGAAAACAAGGACACCAACACAGGTTGCGAGTCATGCTCAGAAGTACTTTCTCCGGAAAAGCAACCTTAATCGTCGACGTCGTAGATCCAGTCTATTTGATATTACCACCGATACGGTCTCTGGAATTCCAATGGAAGAACAGATCCAGCATCCAAATAATATGCCTAATTCACATCTTGGGCACCCTGCGACCTCTGAAACTAACAACATCAATGGATTTTCAATGATGCAAGTATATCCAATGGGTGTTAGTTCTGGACTGATTTCATTCCCCAGTGGGAATCCAATGGAAAATCTCACTCTTGGGCAAGGAAATTCCAAATACAAGGAGCCAATGAAGCTTGTTCATCCAATTCCTATTGCAGATCCTAAAGCTTTTACCGTGTCTGATATCGCCCCAAGATCAAGCTCAACAATTGATCCGCCGACGCTGTCTCTCGGGCTATCCTTGTCGTCTGATCAGAGAAAGACATCATCAAGGCATTCAGGTTTACATGCAATCCCATGTTTGAACAATAGTGGAGATAGCATCATAAGTGTTGCTTGA 906 0.4834 MSRTLSATPTGGDGSSVAAGAGEIVLFGVRVVVDSMRKSVSMNNLSQYEHPQDGSNNTKEDVVAAGYASADEAVVHDSRKHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRKSNLNRRRRRSSLFDITTDTVSGIPMEEQIQHPNNMPNSHLGHPATSETNNINGFSMMQVYPMGVSSGLISFPSGNPMENLTLGQGNSKYKEPMKLVHPIPIADPKAFTVSDIAPRSSSTIDPPTLSLGLSLSSDQRKTSSRHSGLHAIPCLNNSGDSIISVA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1482 301 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Sto3g1482 301 SUPERFAMILY Homeodomain-like 86 141 IPR009057 -
Sto3g1482 301 PANTHER KIN2 18 301 - -
Sto3g1482 301 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
Sto3g1482 301 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Sto3g1482 301 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Sto3g1482 301 CDD SANT 91 136 IPR001005 -
Sto3g1482 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Sto3g1482 301 SMART sant 88 138 IPR001005 -
Sto3g1482 301 Gene3D - 92 141 - -
Sto3g1482 301 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 18 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1482 Sto-Chr3 10906454 10907973 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g1482 Myb_DNA-binding 7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1482 - - aip:107632799 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1482 3 10906454 10907973 Sto12g0841 12 5276643 5278287 CCT