Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1474 ATGACTACCGCCGGCGACGTCTTCAGGCTCAATTTGCCTCAGGTTCTCGAGGAATCGCCTTCCGGATCTCCCGAGCTGCACGTTCTCGCCGTCGATGATAGCCATGTCGATCGCAAGGTCATCGAACGGTTGCTCAAGATTTCTTCCTGCAAAGTGACGGTTGTTGATAGTGGAACCAGAGCTTTGCAGTATTTGGGATTGGATGGAGAGAAGAACTCCATAGGGTTTGATAGTGTGAAGGTTAATCTGATCATGACGGACTATTCTATGCCTGGGATGACAGGATATGAACTTCTCAAGAAGATCAAGCAGGAGTCATCTATTTTTAGAGAAATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACGAGAATTGATAGATGTTTGGAGGAAGGAGCAGAGGAGTTTCTATTGAAACCAGTAAAGCTTTCAGATGTGAAACGCGTTACAGATTTCATCATGAAAGGTGAAAGGaaggaaagagagaagaaatctCATAAAAGAAGGCGATCAGATGATTACAGTTCATCTCCTATAGCATCACCCTTGCTGAAGTCTCATCCATGTGATTCATCATCACCATCTGCCTTGTCCTTGAAGAAATCCAAATTGTGA 618 0.4288 MTTAGDVFRLNLPQVLEESPSGSPELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEKNSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKQESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRVTDFIMKGERKEREKKSHKRRRSDDYSSSPIASPLLKSHPCDSSSPSALSLKKSKL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1474 205 SMART REC_2 26 151 IPR001789 GO:0000160
Sto3g1474 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 203 IPR045279 GO:0009736
Sto3g1474 205 MobiDBLite consensus disorder prediction 176 205 - -
Sto3g1474 205 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Sto3g1474 205 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Sto3g1474 205 Gene3D - 26 188 - -
Sto3g1474 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 11 203 - -
Sto3g1474 205 MobiDBLite consensus disorder prediction 157 175 - -
Sto3g1474 205 SUPERFAMILY CheY-like 25 166 IPR011006 -
Sto3g1474 205 CDD REC_typeA_ARR 28 150 - -
Sto3g1474 205 MobiDBLite consensus disorder prediction 157 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1474 Sto-Chr3 10822829 10824398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1474 19 169 Response Regulator Gene Family AT3G48100 77.124 7.95e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto3g1474 Response_reg 1.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1474 K14492 - gmx:100527518 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1474 3 10822829 10824398 Sto12g0833 12 5228485 5229536 ECH
Sto3g1474 3 10822829 10824398 Sto3g1474 3 10822829 10824398 ECH