Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1465 ATGCCCAGTCCCGGCACGCCGCTTCCTCTAGCCACGCGTCCAACCTGTTACTCCTCCTCGTCTTCTTCTTCcgaaattcaaaaccctaataaCGGCCCAATTTCCGAGGAAGAGGACAAATTGGTGTCGAAGATGAGGAGCGGCGAGATTTTCGAGCAAGAGGAAGCCGTTATTTCGCTTCGAAGCATCACGAGGAACAGAGAGAGCACGCGGATTTCACTGTGCACCCCGCGACTACTCTCGGCCCTCCGATCTCTGATCCCCTCAAGGTACACCCTCGTGCAAGTAAACGCCGTCGCTTCGCTGGTCAATCTCTCCCTCGAGAAATCCAACAAGGTGAAGATCGTACGGCTGGGATTCGTCCCCGACCTCGTCGACGTCCTCAAGGGAGGATCCGACGAATCGCAGGAACACGCCGCCGGAGCGCTCTTCAGCTTAGCCCTAGACGACGACAACAAAATGGCCATCGGAGTCCTCGGCGCGTTGCAGCCGCTAATGCACGCGCTGCTCCGCTCCGACTCGGACCGGACCCGGCACGACTCGGCTCTCGCGCTGTATCACTTGACCCTGGTCCAGAGCAACCGGGTCAAGCTCGTGAAACTCGGGGCGGTTCCGACCCTGCTGGCGATGCTGAAATCGGGTAAATCGATGGGTCGGGTCTTGCTCATACTGTGCAATCTCGCGGTGTGCACGGAGGGCCAATCGGCGATGCTGGACGGCAATGCGGTGGAGTGCTTGGTGGGATTGCTGAGAGGGAACGACTTCGATTCCGAGTCGACTCGGGAGAACTGCGTGGCCGCGTTATACGCGCTCAGCCATGGGAGCTTGAGGTTCAAAGCTCTGGCGAAGGAGGCAAGAGCTGTGGAGGTGTTGAAGGAGATTGAAGAAAGAGGAACGGAGAGAGCCAGAGAGAAGGCGAAGAGAATATTGCAGATGATGCGAGCAGGAGGAGAGGAGGAAGGGGATGAAGGAACCGGGTCGAATCTCGATGCGGTTTTGGGCTCGGGTGGGTTGAACCGGAATAATCGGTTCCGAGGTGGGGGAGGGAGGATTGGGAATGCAGCGAACTCAACGGttttttag 1083 0.5706 MPSPGTPLPLATRPTCYSSSSSSSEIQNPNNGPISEEEDKLVSKMRSGEIFEQEEAVISLRSITRNRESTRISLCTPRLLSALRSLIPSRYTLVQVNAVASLVNLSLEKSNKVKIVRLGFVPDLVDVLKGGSDESQEHAAGALFSLALDDDNKMAIGVLGALQPLMHALLRSDSDRTRHDSALALYHLTLVQSNRVKLVKLGAVPTLLAMLKSGKSMGRVLLILCNLAVCTEGQSAMLDGNAVECLVGLLRGNDFDSESTRENCVAALYALSHGSLRFKALAKEARAVEVLKEIEERGTERAREKAKRILQMMRAGGEEEGDEGTGSNLDAVLGSGGLNRNNRFRGGGGRIGNAANSTVF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1465 360 PANTHER U BOX DOMAIN-CONTAINING 7 347 - -
Sto3g1465 360 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 7 347 - -
Sto3g1465 360 SUPERFAMILY ARM repeat 40 313 IPR016024 -
Sto3g1465 360 Pfam Armadillo/beta-catenin-like repeat 149 189 IPR000225 GO:0005515
Sto3g1465 360 MobiDBLite consensus disorder prediction 12 34 - -
Sto3g1465 360 Gene3D - 39 171 IPR011989 -
Sto3g1465 360 SMART arm_5 108 148 IPR000225 GO:0005515
Sto3g1465 360 SMART arm_5 149 190 IPR000225 GO:0005515
Sto3g1465 360 SMART arm_5 230 273 IPR000225 GO:0005515
Sto3g1465 360 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 119 156 IPR000225 GO:0005515
Sto3g1465 360 Gene3D - 172 320 IPR011989 -
Sto3g1465 360 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1465 Sto-Chr3 10723533 10724615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1465 3 360 U-box Gene Family AT5G65200 61.008 1.15e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1465 - - zju:107407140 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1465 3 10723533 10724615 Sto12g0825 12 5189743 5191341 ECH
Sto3g1465 3 10723533 10724615 Sto3g1465 3 10723533 10724615 ECH