Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1426 ATGAGGAATTTCCACTGGTTTAAACAAGCTTCGAACAAGAATGACAAGTCAGGGAGGAGGAGGCTTTCGCTTGCGGAATACAAGCGAGCAGTGTCTTGGTCCAAGTATTTGGTCTCATCTGGAGCTGCCATTAAGGAAGGAGGAGAAGAGGATTGGAGTGCTGATATGTCTAAGTTGTTGATTGGGCCAAAGTTTGCAGTTGGAAGGCATAGTAGGATCTACAAAGGCGTTTACAAGAACAAGAATGTGGCTATTAAGATCATAAGTCAACCAGAGGAGGATGAGCACTTGGCTTCTATGCTTGAGAATCAGTTTAATTTTGAGGTTGCCTTGCTCTTTCGCTTGCACCATCCTAATATCATCAAGATCGTTGCTGCTTGCAAGAAACCTCCTGTCTTCTGCATAATTACTGAATACATGCCTGGCGAATCGTTGAGAAAATACCTTCGTAAGCAAAAACCATATTCAGTACCACACAAACTTGTTCTGAAATTAGCCATAGACATAGCACGGGGTATGCAATATCTTCATTCTCAGGGGATACTTCACAGGGATCTCAAATCAGAAAATCTACTGTTGGGAGGAGATATGAGTGTCAAAGTTGCAGACTTTGGAATCTCATGTTCAGAATCCGAGTGCTTTACTGCTAGTGAATTTATCGGAACTTATCGTTGGATGGCACCCGAAATGATGAAAGATAAGAAACATTCCAAGAAAGCAGATGTCTACAGTTTTGGCATAGTTTTATGGGAACTTTTAACAGCATTGACACCGTATGAGAACATGACACCAGAGCAGGCAGCATTTGCAGCCTCCCAGAAGAATGTAAGGCCACCATTGCCACCTGAATGTCCATTGGCATTTAGTCATCTTGTGAGGAGGTGCTGGGCAGGGAAGCCAGTGAAAAGGCCACACTTTGATGAGATAGTTTCCATTTTAGAGGGATATTCAGAATCCCTCAAGGAGGATCCACACTTCTTCTCTAATTTCATTCCACcttcttctacttcttcttcttcctccactcGTAATATTTTTTTGGGATGCTTACCCAAATGGATTTCTGGTCAAAGCTTAAAGATCAAAGATTAA 1092 0.4103 MRNFHWFKQASNKNDKSGRRRLSLAEYKRAVSWSKYLVSSGAAIKEGGEEDWSADMSKLLIGPKFAVGRHSRIYKGVYKNKNVAIKIISQPEEDEHLASMLENQFNFEVALLFRLHHPNIIKIVAACKKPPVFCIITEYMPGESLRKYLRKQKPYSVPHKLVLKLAIDIARGMQYLHSQGILHRDLKSENLLLGGDMSVKVADFGISCSESECFTASEFIGTYRWMAPEMMKDKKHSKKADVYSFGIVLWELLTALTPYENMTPEQAAFAASQKNVRPPLPPECPLAFSHLVRRCWAGKPVKRPHFDEIVSILEGYSESLKEDPHFFSNFIPPSSTSSSSSTRNIFLGCLPKWISGQSLKIKD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1426 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Sto3g1426 363 PANTHER SERINE-THREONINE PROTEIN KINASE 1 335 - -
Sto3g1426 363 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 335 - -
Sto3g1426 363 SUPERFAMILY Protein kinase-like (PK-like) 50 313 IPR011009 -
Sto3g1426 363 SMART serkin_6 59 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1426 363 Gene3D Phosphorylase Kinase; domain 1 46 141 - -
Sto3g1426 363 Gene3D Transferase(Phosphotransferase) domain 1 142 341 - -
Sto3g1426 363 CDD STKc_MAP3K-like 68 313 - -
Sto3g1426 363 Pfam Protein tyrosine and serine/threonine kinase 64 313 IPR001245 GO:0004672|GO:0006468
Sto3g1426 363 ProSiteProfiles Protein kinase domain profile. 59 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1426 363 PRINTS Tyrosine kinase catalytic domain signature 137 150 IPR001245 GO:0004672|GO:0006468
Sto3g1426 363 PRINTS Tyrosine kinase catalytic domain signature 175 193 IPR001245 GO:0004672|GO:0006468
Sto3g1426 363 PRINTS Tyrosine kinase catalytic domain signature 221 231 IPR001245 GO:0004672|GO:0006468
Sto3g1426 363 PRINTS Tyrosine kinase catalytic domain signature 240 262 IPR001245 GO:0004672|GO:0006468
Sto3g1426 363 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1426 Sto-Chr3 10415912 10418713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1426 32 350 MAP Kinase Kinase Kinase AT1G62400 54.908 1.48e-127 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto3g1426 PK_Tyr_Ser-Thr 4.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1426 - - pop:7457731 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1426 3 10415912 10418713 Sto12g0799 12 5048635 5051031 CCT
Sto3g1426 3 10415912 10418713 Sto3g1426 3 10415912 10418713 ECH