Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1410 ATGGATTTGGAGACAAAGCTGAGATCAGAAAACTATGAGTGCTACCAGCCAATGCAATTGCAAGAAATGGACATGAAATCCAACCTGAAAGATGTGGAGCCTCCTATGGATTTTGGGGTTCCTAATTCATCTCATCAGAGTAACAACATTTTCTTGCAAGATTTACTCCATATTGATCCATTTCAAGCAAATGGGGCCAGCAAAGTGAGGAAAAAGTCCAGTGCAGTAAAGGGACAGTGGACAGTGGAAGAAGATagGTTGCTAATTCAACTGGTTGGACAATATGGGGTGAGAAAGTGGTCCCACATCGCTCAGAGTTTACCAGGAAGAATAGGCAAACAGTGTAGAGAACGATGGCATAATCACTTAAGACCTGATATTAAGGTCCCAGATTTTTGCTTCGACGAGGATGAGAATTTGAGTTTGTTTCAAGAGGGGACGTGCAATATTGAGACTCTGCTTGATGATATGCCTTGTGCTCCTCCTACTATGAATGAGGCAGATTTTGGAGAAAAATTGCACTTCTATGGAAATGTTAATAACCAATTTGAGTCAGAGAAATCACTGGAAGTGCAAGTCAAGAAGGAGATGGATTTGGTGGAGATGATGTCTCAGGTCAATGAGGCTCTTTGA 633 0.4155 MDLETKLRSENYECYQPMQLQEMDMKSNLKDVEPPMDFGVPNSSHQSNNIFLQDLLHIDPFQANGASKVRKKSSAVKGQWTVEEDRLLIQLVGQYGVRKWSHIAQSLPGRIGKQCRERWHNHLRPDIKVPDFCFDEDENLSLFQEGTCNIETLLDDMPCAPPTMNEADFGEKLHFYGNVNNQFESEKSLEVQVKKEMDLVEMMSQVNEAL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1410 210 ProSiteProfiles Myb-like domain profile. 72 123 IPR001005 -
Sto3g1410 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 127 IPR017930 -
Sto3g1410 210 PANTHER BNAC03G62830D PROTEIN 68 144 - -
Sto3g1410 210 SUPERFAMILY Homeodomain-like 73 129 IPR009057 -
Sto3g1410 210 SMART sant 76 125 IPR001005 -
Sto3g1410 210 PANTHER MYB PROTEIN-RELATED 68 144 - -
Sto3g1410 210 CDD SANT 80 123 IPR001005 -
Sto3g1410 210 Gene3D - 76 128 - -
Sto3g1410 210 Pfam Myb-like DNA-binding domain 77 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1410 Sto-Chr3 10298055 10300100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1410 68 149 MYB Transcription Factor Family AT4G18770 68.293 6.72e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g1410 Myb_DNA-binding 5.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1410 K09422 - thj:104808391 125.946