Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1378 TTGAGGAAGGGGCTATGGTCCCCTGAAGAAGATGAGAAGCTCTTCAATTACATTACCTCCTATGGAGTTGGGTGCTGGAGTTCCGTCCCCAAATTAGCTGAGATGTGGAAAGAGCTGCCGATTGAGATGGATCAATTATCTGAGGCCCGATTTGAAGAGAGGCATGTTCTCCCAAGAGGAGGAGGATCTCATCATCACTCTTCACCAAGTTCTAGGcaacaggtatatatatatatatatatacctacctctcattattattaa 264 0.3939 LRKGLWSPEEDEKLFNYITSYGVGCWSSVPKLAEMWKELPIEMDQLSEARFEERHVLPRGGGSHHHSSPSSRQQVYIYIYIPTSHYY 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1378 87 PANTHER MYB DOMAIN PROTEIN 55 1 34 - -
Sto3g1378 87 PANTHER MYB16 PROTEIN 1 34 - -
Sto3g1378 87 SUPERFAMILY Homeodomain-like 2 34 IPR009057 -
Sto3g1378 87 ProSiteProfiles Myb-like domain profile. 1 31 IPR001005 -
Sto3g1378 87 Pfam Myb-like DNA-binding domain 3 32 IPR001005 -
Sto3g1378 87 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 32 IPR017930 -
Sto3g1378 87 Gene3D - 1 55 - -
Sto3g1378 87 CDD SANT 6 31 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1378 Sto-Chr3 9996145 9996505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1378 1 35 MYB Transcription Factor Family AT1G57560 82.857 7.32e-15 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g1378 Myb_DNA-binding 3.5e-06 CL0123