Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1371 ATGGAATCTAAACATAGAACTACCATTAAATTCCTCTGTAGCTACGGCGGCAAGATTCTTCCACGTTCTACCGACGGCGAACTCCGTTACGTCGGCGGCCATACTCGAGTCCTCGCCGTCGATCCTTCCATTTCCTtttcagAGCTGATGGTGAAGATTGGAGAGTTATGTGGTTCATCCGTGAAGTTGAAGTGTTCATTGCCTAACGGAGACCTCGAGACGTTGATTTCGATTACCAGTGATGAGGATTTGGCCAATATAATCGAGGAATACAATCGCGCTTCGTCGTCGTTGGCTCATCCGTTAAAGATCAGAGCCATTCTCTCGCCGCCGAAGTCTCTAAAGAAAGTATCGCCTCCTCCGTCTTCGGCGACGAGCGCCGGTCACTCTCCGACTAGATCGGCCAACTCCTCCACCGAATCGTTGCCGTATTCCATGGCGTATCGCTTCGTCCGTCCGGTTGCGTATCCGGTTGGTGTCCGTAACGGATCGGGGAAAGCTTGTTGCTATACCGGCGGCCAATTCGACGGAAGCCCTAGATACTTGTATAGTCGTCCCCGCGGCAACAATTTCTGTCACTGA 582 0.5137 MESKHRTTIKFLCSYGGKILPRSTDGELRYVGGHTRVLAVDPSISFSELMVKIGELCGSSVKLKCSLPNGDLETLISITSDEDLANIIEEYNRASSSLAHPLKIRAILSPPKSLKKVSPPPSSATSAGHSPTRSANSSTESLPYSMAYRFVRPVAYPVGVRNGSGKACCYTGGQFDGSPRYLYSRPRGNNFCH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1371 193 MobiDBLite consensus disorder prediction 112 139 - -
Sto3g1371 193 SMART PB1_new 23 111 IPR000270 GO:0005515
Sto3g1371 193 CDD PB1_UP2 12 108 - -
Sto3g1371 193 Gene3D - 29 107 - -
Sto3g1371 193 SUPERFAMILY CAD & PB1 domains 25 117 - -
Sto3g1371 193 Pfam PB1 domain 26 95 IPR000270 GO:0005515
Sto3g1371 193 MobiDBLite consensus disorder prediction 118 139 - -
Sto3g1371 193 PANTHER PB1 DOMAIN PROTEIN 1 193 - -
Sto3g1371 193 PANTHER OS05G0427100 PROTEIN-RELATED 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1371 Sto-Chr3 9947077 9947742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1371 1 93 MAP Kinase Kinase Kinase AT3G46920 44.086 1.78e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1371 - - gmx:100810563 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1371 3 9947077 9947742 Sto12g0745 12 4647630 4648299 CCT
Sto3g1371 3 9947077 9947742 Sto3g1371 3 9947077 9947742 ECH