Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1365 atggaatcTGGAGGTGTGTTCTACTCAGTCGATGAGTTCAGATTGGACGCGAAGTGGCTAATTGATCCCAAGCTTCTATACGTTGGACCCAGAATTGGAGAGGGAGCTCATGGAAAAGTCTACGAGGGAAAATATAAAAACCAGACGGTTgctattaaaattttacataaaggAGAAACTACAGAAGAGATCGCCAAGAGAGAAGCTAGATTTGCAAGGGAGGTGGCAATGTTATCTAGAGTTCAACATAAGAACTTGGTGAAGGTTGGAATTTGGTCTAGTAAAAGTTGTCACCATGTTTCTCAACAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTCACTGAACTCTTAATTGGAGGAACTTTGCGAAAGTATTTGCTTAACATGCGCCCAAAATGCTTGGACATACATGTTGCTGTTGGTTTTGCCCTTGATATTGCTCGTGCTATGGAATGTCTGCATTCTCATGGGATTATCCACCGTGACCTGAAACCTGAAAACTTACTTTTAACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGCTTAGCAAGAGAGGAGTCATTGACAGAGATGATGACTGCTGAAACAGGAACTTATCGATGGATGGCTCCAGAGTTGTATAGCACTGTCACACTCAGGCAGGGAGAGAAGAAGCATTACAACCATAAAGTGGATGCTTATAGCTTTGCAATCGTTCTTTGGGAGCTTTTACATAACAAATTACCTTTTGAAGGCATGTCAAATCTCCAGGCAGCTTATGCAGCAGCATTTAAGAATGTAAGACCCAGTGCAGAGAATCTCCCTGAAGAATTGGCTTTAATTCTAACTTCATGCTGGCAAGAAGATCCAAATGCCCGGCCCAACTTCACTCAAATAATTCAAATGCTACTCAATTATCTATACACCGTTTCACCTCCTGAACCTGTGATTCCTAAAAGAATATTCGCTTCTGAGAACACCGTCTTCTCACCTGACTCCCCTGGTACAAGCTCTTTGATGGCAAAATGTGACAACACAGGGGATACCCCAAGAGGAAAGGAAGAACTTCAACCTAAAGAAGTCTATGAGTGCAGTCCCAAGAGTGACAGTGAGCTTCAGTTTCTTTCTATTGATATAGGAGTGAACCCATTTACCAGTTTCCAGAGCTCCGAGAACCCCACAAGAGTAAAGCACACTAACCATTGTAACCTCATTAGGATCCACATTAGATTTTTGCATCtcactaaacaaactcagagcctCGTTGCATCTATTTGCTTGACTATACCCAGATATCATAGCACTCCATGCAACAACATCCCTATGCTTCATTTGATTAAACAGTATTCTTGCCCTGTCCACTTGACCACATTTTGCATACATGTCAAGAAGCGAAGTAATCAAATAACCATAGTAACCACATCAAACCCAATATCCATTTCCCGCATCTCAAGAAACAAGTTCACAACCTCCTCCCAACACCCGTTCTTGGCATACCCAGCTAACATTGCATTCCAAGCAACAAGCCCTCGTTCAGACATTTCATCGAACACTCTACGTGCAACCTCAATATCCGAGCATATTGCATACATATGGATCAGAGTGTTCTCCACAAACCCATATGACTGA 1623 0.4116 MESGGVFYSVDEFRLDAKWLIDPKLLYVGPRIGEGAHGKVYEGKYKNQTVAIKILHKGETTEEIAKREARFAREVAMLSRVQHKNLVKVGIWSSKSCHHVSQQFIGACKEPVMVIVTELLIGGTLRKYLLNMRPKCLDIHVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELALILTSCWQEDPNARPNFTQIIQMLLNYLYTVSPPEPVIPKRIFASENTVFSPDSPGTSSLMAKCDNTGDTPRGKEELQPKEVYECSPKSDSELQFLSIDIGVNPFTSFQSSENPTRVKHTNHCNLIRIHIRFLHLTKQTQSLVASICLTIPRYHSTPCNNIPMLHLIKQYSCPVHLTTFCIHVKKRSNQITIVTTSNPISISRISRNKFTTSSQHPFLAYPANIAFQATSPRSDISSNTLRATSISEHIAYIWIRVFSTNPYD 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1365 540 PRINTS Tyrosine kinase catalytic domain signature 117 130 IPR001245 GO:0004672|GO:0006468
Sto3g1365 540 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Sto3g1365 540 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Sto3g1365 540 PRINTS Tyrosine kinase catalytic domain signature 272 294 IPR001245 GO:0004672|GO:0006468
Sto3g1365 540 Gene3D Transferase(Phosphotransferase) domain 1 122 310 - -
Sto3g1365 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Sto3g1365 540 PANTHER SERINE-THREONINE PROTEIN KINASE 1 343 - -
Sto3g1365 540 CDD STKc_MAP3K-like 32 301 - -
Sto3g1365 540 SMART serkin_6 26 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1365 540 Gene3D Phosphorylase Kinase; domain 1 14 120 - -
Sto3g1365 540 ProSiteProfiles Protein kinase domain profile. 26 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1365 540 Pfam Protein tyrosine and serine/threonine kinase 29 301 IPR001245 GO:0004672|GO:0006468
Sto3g1365 540 SUPERFAMILY Protein kinase-like (PK-like) 19 329 IPR011009 -
Sto3g1365 540 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Sto3g1365 540 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1365 Sto-Chr3 9909275 9915366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1365 9 362 MAP Kinase Kinase Kinase AT5G50180 77.684 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto3g1365 PK_Tyr_Ser-Thr 3.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1365 - - gmx:100796593 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1365 3 9909275 9915366 Sto12g0739 12 4624151 4627042 ECH
Sto3g1365 3 9909275 9915366 Sto3g1365 3 9909275 9915366 ECH