Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1362 ATGCCGCAGGATTCGTCTGATAAGGACCTAGACGATCCTGATTCCGAGTTCGCCGAGATTGATCCCACCGGTCGATATGGTCGGTACAAGGAAGTTTTAGGGAAGGGGGCTTTCAAGAAGGTATACAGGGCATTTGATGAGTTGGAGGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCAGATCTATTGCGTAACAATGAAGATATGGAGCGTCTATATTCAGAAGTTCATTTGCTGAAGACTTTGAAGcataagaatataataaaattttataattcatgGGTAGACACAAACAATGAGAACATCAACTTCATTACTGAAATTTTTACGTCGGGAACATTACGCCAATACCGGAAGAAACATAAGCATGTTGACTTGAGAGCATTGAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCAGTTATTCATCGTGATTTAAAATGTGACAACATATTTGTTAATGGGAATCACGGTGAGGTTAAAATTGGTGACTTGGGATTGGCTGCCATCCTTCAGCAGGCCAACTCAGCCCACAGTGTTATAGGAACTCCGGAGTTTATGGCTCCTGAACTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTGACTGTTGAATATCCATATGTTGAATGTGCCAATGCTGCTCAGATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCACTGGCTAAGGTGAAAGATCCTGGAGTTAAAGCATTTATAGAAAAATGTATTGCTCATGTTTCTGAGCGGTTGCCTGCAAAGGAACTCTTGATGGATCCGTTTCTTCTGCCCAGTGATGAAACTGACAGTTTTGGCCGTTCTATAAAGCCCAGAAACAAAGATTCAGGACATAGTGGCGATCCTTCTACTAGTAAATATGCTGAAGACATTTCCACTGAGACAAGTAGGGAATTCAAGGTGGAAGGTCATAGGAAAGATGTCAATACTATATTTCTGAAACTGCGAATAGCGGACTCCTTAGGTCATATTCGCAACATTCACTTCCCTTTTGATATTGAGGCAGACACTGCAATTGCTGTTGCTggtgaaatggttgaggaattGGAACTCACAGATCAAGATGTTACAACTATTGCTGAGATGATTGACTCAGAAATTCGATATCTCATTCCAGACTGGAATGCTAATGAAATTCCTCGTACTGAAGGTTCTGGTCAAGAATTAGCAGTTACAGCTGACCATACCTCTGAAAGTAGGGATGCAGATTCTCCATTGGGAAATGATTCTGTGGCTTCTACCGGTAGTCTTACTCTGGAAAGGTTACCTTCAGGTCGTAACTACTGGTCTGACTCGCCCAAGACAGCAGGTAGACACTCTCCAGCAAGGCTTTGTGCTTCAAATTTGTCTAATGAAGTGGATGTGCACACTGAGCAAGTAGGAAGCTTGACTGCAAACGGTGCTACTTCAGTTGAGCAGCAGGAGAAGGAATCTAGTGGCACTGCTGATTCCCTTTCCAGTCAGAAAAGTATTACTACATCTGGAGAATTACATGAAACCAATGAAGAATCTCCtctggaagaagaagaagaagaagaagaagaacctatTAAACTGAACGATGCCGAAACAGAAGATGTCGACATAATTGTTGCAAAACTTGAGGAATTGCTAGCAAAACAGCGAGAGGAGTTGGATGATCTAAAGAGGAAGCATAAATTAGCTGTCTCAGATCTTCTGAAGGAACTTCCTCCAGAAATATGCCATAAGGTCTTAAATATTTGCAACCTGCAGGAGATATCTGACATTGACAATGTACAgagtgaaatttttttagtacAGATGTCCTTGCCTGCTACACTTGGAACCGGTGGCTCCTCAACATCAATACTTAGGCTTTCACCATTGATGCTTGAGAGAGGGTATCCCTGA 1959 0.4033 MPQDSSDKDLDDPDSEFAEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNNEDMERLYSEVHLLKTLKHKNIIKFYNSWVDTNNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVKDPGVKAFIEKCIAHVSERLPAKELLMDPFLLPSDETDSFGRSIKPRNKDSGHSGDPSTSKYAEDISTETSREFKVEGHRKDVNTIFLKLRIADSLGHIRNIHFPFDIEADTAIAVAGEMVEELELTDQDVTTIAEMIDSEIRYLIPDWNANEIPRTEGSGQELAVTADHTSESRDADSPLGNDSVASTGSLTLERLPSGRNYWSDSPKTAGRHSPARLCASNLSNEVDVHTEQVGSLTANGATSVEQQEKESSGTADSLSSQKSITTSGELHETNEESPLEEEEEEEEEPIKLNDAETEDVDIIVAKLEELLAKQREELDDLKRKHKLAVSDLLKELPPEICHKVLNICNLQEISDIDNVQSEIFLVQMSLPATLGTGGSSTSILRLSPLMLERGYP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1362 652 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Sto3g1362 652 Coils Coil 560 587 - -
Sto3g1362 652 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Sto3g1362 652 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1362 652 MobiDBLite consensus disorder prediction 493 528 - -
Sto3g1362 652 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1362 652 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1362 652 SUPERFAMILY Protein kinase-like (PK-like) 29 317 IPR011009 -
Sto3g1362 652 CDD STKc_WNK 25 285 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 493 551 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 409 470 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 1 21 - -
Sto3g1362 652 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 618 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 293 327 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 294 308 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 531 550 - -
Sto3g1362 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Sto3g1362 652 Gene3D - 338 421 - -
Sto3g1362 652 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 618 - -
Sto3g1362 652 MobiDBLite consensus disorder prediction 432 463 - -
Sto3g1362 652 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1362 Sto-Chr3 9883936 9887748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1362 17 417 MAP Kinase Kinase Kinase AT3G51630 57.073 2.35e-164 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto3g1362 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1362 K08867 - gmx:100301899 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1362 3 9883936 9887748 Sto3g1362 3 9883936 9887748 ECH