Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1352 ATGCCTCTCCAATCATCTCTCAAACACTTTCCATTCTTTGAGTTGAACCCCACCTTTTACCTCTCTTTCCTTTGCTTCATCATCACGTTATTAATCTTCGTGTTTAAGCTCACCAGAAGCAGAGGAAATTCCAATAACAATCTGCCTCCGTCCCCTCCTAAGCTTCCATTCATAGGCAATCTTCATCAACTAGGCACACTCCCTCATCGTTCTTTCCAATCTCTCTCACACAAATATGGCCCTCTCATGTTGCTCCACTTAGGCCAAACCCCTACTCTTATTGTCTCTTCTGCACAAATCGCCAAAGAAATAGTCAAATCCCACGACGTCCTTTTCTCAAACCGACCCCAAACCACAGCTGCCAGAGTCCTCCTCTATGGATGCAGAGACGTGGGTTTCGCAGCCTATGGTGAAGAGTGGAGACAGAAGAGGAAAATCTGTGTTCTTGAACTTCTCAGCCTTAAAAGGGTTCGATCATTTCAGTTCACCAGAGAAGAGGAAGCTTCAGATTTGGTTGGAAAGATTCGTGAAGCGTGTGAGAAGAAAATCAATGGGTCCCCTGTATTAATTAATCTCAGCCAGATGCTAATTGCAACCTCTAACAATATAGTTTCAAGATGTGTTCTTGGGCGGAAGTATGATTCACCAGATGGTACAAAAAGTTTTGGTGACGTGGCAAGGACTATGATGATTCATATGGCAGCTTTCAGTTTTGGGAATTTCTTCCCTTCATTGGGTTGGATGGATGTAGTTACAGGGCTAATTTCAAAAATGAAGGCAACTTTTGCAGAATTAGATACTTTCTTTGATGAGGTCATTGCACAACATAAGATGGCCAAAAGCAATGATGATGAATCAGAGAAGAAAGACTTGTTGGATATTCTGCTTCAACTTCAAGATGATGATATGCTTGATTTTGAGCTCACCCGGGATGATCTCAAAGCAATAATAATGGATATGTTCGTGGGAGGAAGTGACACAAGTTCAACAGCTTTAGAATGGACTTTTGCAGAGCTGTTGAAGAATCCAACAGCAATGAAGAAAGCACAGGAAGAGGTAAGAAGAGTGGTGGGGCATAAATCAAAAATAGATGAAAATGATGTGAGACAAATGAAGTACTTGGAATGTGTAGTGAAAGAAAGTTTAAGATTACATCCTCCACTTCCTCTTTTGGTTCCAAGAGAAACCAGGTCTATTGTGAAACTAGGAGAATACGATATTCCTCCCCAAACAAGTGTATTTGTAAATGCATGGGCCATTCAAAGAGATCCTGAACTTTGGGAGAGACCAGAAGAGTTCATTCCAGAGAGGTTTGAAAATAATGAGGTTGATTTCAAAGGTCAAGACTTGCAATTTGTACCTTTTGGTTTTGGGAGAAGGGGATGCCCTGGGATTTCATTCGGGGTTGCTTCTGTTGAGTATTTGCTTGCTGTTCTTCTGTTTTGGTTCGACTGGAAGTTACCTAGTggaactactactactacttcaCAAGACCTAGATATGAGTGAGGCATACGGACTTACTGTGAATAAGAAAGTACCAATTCATGTGGAACCAATACCTTACTCTTTTGGACCATAG 1581 0.4092 MPLQSSLKHFPFFELNPTFYLSFLCFIITLLIFVFKLTRSRGNSNNNLPPSPPKLPFIGNLHQLGTLPHRSFQSLSHKYGPLMLLHLGQTPTLIVSSAQIAKEIVKSHDVLFSNRPQTTAARVLLYGCRDVGFAAYGEEWRQKRKICVLELLSLKRVRSFQFTREEEASDLVGKIREACEKKINGSPVLINLSQMLIATSNNIVSRCVLGRKYDSPDGTKSFGDVARTMMIHMAAFSFGNFFPSLGWMDVVTGLISKMKATFAELDTFFDEVIAQHKMAKSNDDESEKKDLLDILLQLQDDDMLDFELTRDDLKAIIMDMFVGGSDTSSTALEWTFAELLKNPTAMKKAQEEVRRVVGHKSKIDENDVRQMKYLECVVKESLRLHPPLPLLVPRETRSIVKLGEYDIPPQTSVFVNAWAIQRDPELWERPEEFIPERFENNEVDFKGQDLQFVPFGFGRRGCPGISFGVASVEYLLAVLLFWFDWKLPSGTTTTTSQDLDMSEAYGLTVNKKVPIHVEPIPYSFGP 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1352 526 PANTHER CYTOCHROME P450 71B11-RELATED 11 523 - -
Sto3g1352 526 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 523 - -
Sto3g1352 526 SUPERFAMILY Cytochrome P450 49 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 Pfam Cytochrome P450 49 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Sto3g1352 526 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 Gene3D Cytochrome P450 33 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1352 526 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1352 Sto-Chr3 9808776 9810456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1352 39 516 Cytochrome P450 AT3G48270 43.633 4.40e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1352 K20617 - jre:108986000 615.535