Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1350 ATGCCCCTCCCATCATCCTTCAAACACTTGCCATTACTTCAAAGCAGAGGAAATTCTAATAATAATCTGCCTCCGTCCCCTCCTAAGCTTCCATTTATAGGCAATCTCCATCAACTAGGCACTCTTCCTCATCGTACTTTCCGAAACCTTTCACTCAAATATGGCCCTCTCATGTTGCTCCACTTAGGCCAAACCCCTACTCTTATTATCTCATCCGCACAAATCGCCAAAGAAATAGTCAAATCCCACGACGTCGTTTTCTCAAACCGACCCCACACCACAGCTGCCAGAATCCTCCTCTATGGATGCAGAGACGTGGGTTTCGCAGCCTATGGTGAAGAGTGGAGACAGAAGAGGAAAATCTGTGTTCTTGAACTTCTCAGCCTTAAAAGGGTTCGATCATTTCAGTTCATCAGAGAAGAGGAAGCTTCAGATTTGGTGGGAAGGATTCGTGAAGCATGTGAGAAGAAAATTAATGGGTCCCCTGTATTAATTAATCTCACTCACATGCTTAGTGCAACATCAAACAATATAGTGTCAAGATGTGTTCTTGGGCACAAGTATCATTCCCCAAATGGTACTAAAAGTTTTGGTGAAGTGGGAAGGACAATGATGGTTCATTTGACGGCTTTCAGTTTTGGGAATTTCTTCCCTTCATTGGGCTGGATGGATGTTGTCACAGGgttaattccaaaaatgaaggcAACTTTTGCAGAATTAGATACTTTCTTGGATAAGGTCATTGCAAAACATAAGATGGCCAAAAGCAATGATGATGAATCACAGAAGAAAGACTTCGTGGATATTCTGCTTCAAGTTAAAGATGATATGCTTGATTTTGAGCTCTCCAATGATGATCTCAAAGCAATAATAGCGGATATGTTCGTGGGAGGAAGTGACACAAGTTCAACAGCTTTAGAATGGACTTTTGCAGAGCTGTTGAAGAATCCAACAGCAATGAAGAAAGCCCAGGAAGAGGTAAGAAGAGTGGTGGGGCATAAATCAAAAATAGATGAAAATGATGTCAGACAAATGAAGTATTTGGAATGTGTAGTGAAAGAATGTTTAAGATTACATCCTCCATTTCCTCTTTTGGTTCCAAGAGAAACAACGTCTATTGCGAAACTAGGAGAATACGATATTCCTCCCCAAACAAGTGTATTTGTAAATGCATGGGCTATTCAGAGAGATCCTGAACTTTGGGAGAGACCAGAAGAGTTCATTCCAGAGAGGTTTGAAAATAGTGAGGTTGATTTCAAAGGCCAAGACTTTCAATTAGTACCTTTTGGTTTTGGGAGAAGGGGATGCCCTGGGATTTCATTTGGGGTTGCTTCTGTTGAGTATTTGCTTGCTGTTCTTCTGTTTTGGTTCGACTGGAAGTTACCTAGTGGAACTACTACTTCTTCACAAGACATAGATATGAGTGAGGCATATGGACTTACTGTCAATAAGAAAGTACCAATTCATGTCGAACCAATACCTTACTCTTTTGGACCTTAG 1500 0.4067 MPLPSSFKHLPLLQSRGNSNNNLPPSPPKLPFIGNLHQLGTLPHRTFRNLSLKYGPLMLLHLGQTPTLIISSAQIAKEIVKSHDVVFSNRPHTTAARILLYGCRDVGFAAYGEEWRQKRKICVLELLSLKRVRSFQFIREEEASDLVGRIREACEKKINGSPVLINLTHMLSATSNNIVSRCVLGHKYHSPNGTKSFGEVGRTMMVHLTAFSFGNFFPSLGWMDVVTGLIPKMKATFAELDTFLDKVIAKHKMAKSNDDESQKKDFVDILLQVKDDMLDFELSNDDLKAIIADMFVGGSDTSSTALEWTFAELLKNPTAMKKAQEEVRRVVGHKSKIDENDVRQMKYLECVVKECLRLHPPFPLLVPRETTSIAKLGEYDIPPQTSVFVNAWAIQRDPELWERPEEFIPERFENSEVDFKGQDFQLVPFGFGRRGCPGISFGVASVEYLLAVLLFWFDWKLPSGTTTSSQDIDMSEAYGLTVNKKVPIHVEPIPYSFGP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1350 499 Pfam Cytochrome P450 24 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PANTHER CYTOCHROME P450 71B11-RELATED 15 494 - -
Sto3g1350 499 SUPERFAMILY Cytochrome P450 24 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 494 - -
Sto3g1350 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Sto3g1350 499 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 Gene3D Cytochrome P450 10 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 51 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 75 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1350 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1350 Sto-Chr3 9797824 9799498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1350 24 495 Cytochrome P450 AT3G48280 44.726 2.83e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1350 K20617 - jre:108986006 629.402