Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1342 ATGTTACTCCACTTAGGCCAAACTCCGACTCTTGTGGTTTCTTCTCCAGATATCGCAAGAGAAATAGTCAAATCCCACGACGTCGTTTTCTCCAACCGCCCCCAAACTACCCCTGCCAAAATCCTCCTCTATGGATGCAAGGACGTGGGTTTCGCACCCTACGGTGAAGAGTGGAGACAGAAGAGGAAAATATGTGTTTTTGAACTTCTCAGCCTCAAAAGAGTTCAATGTTTTCAATTCATCAGGAAAGAGGAAGTTGAAGAGATGGTTAATAACATACGTGGAGCATGCGAGAGTGTAATTAATCTCTCTCAGATGCTTATTACAACCTCCAACAACGTAATGTCGAGATGTGTTCTTGGGCACAAGTACGAGGCACCGCATGGTAGTAGTAGCTTTGGTGACGTGGCAAGGAAAGCGATGACTCAAATCGTGGCCTCCGGTGTGGGAGATTTCTTCCCCTCTTTGGGATGGATTGACTATGTGACAGGACTCATTCCCAAATTGAAGGCTACTTCCGCAGAATTGGATGCTTTCTTTGAGAATGTGATTCAACAACataagatgatgatgaaaaacAATTATGAAGGTGAGCCTTGTGATTATGATAGGAAAGACTTGGTGGATATTCTGCTCCAACTTCGACAAGATGGCATGCTTGACTTCGAGCTCACTAACGATGACCTCAAAGCAATCCTAATGGACATGTTCGTGGGAGGAAGTGACACAAGTTCGACAACGTTGGAGTGGGCCATGGCAGAGCTGTTGAGAAATCCAACAACAATGAAGAAAGCCCAGGAAGAGGTAAGAAGAGTGGTGGACAAGAAATCAAAGGTAGAAGAAAAGGATGTGGGAGAAATGAAGTACTTGGAATGTGTAGTGAAAGAAACTTTAAGATTACATCCTCCTGTTCCTCTTTTGCTtccaagaaaaacaagttcaGGCGTGAAGCTAAGAGGCTACAATATTCCCCCAAAAACAAACGTGTACATTAATGCATGGGCTATCCAGAGAGATCCTGAAATTTGGGAGAGGCCACAAGAATTCGTCCCAGAGAGATTTGAGAACAACGAGGTTGATTTTAAAGGCCAATATTTTGAATTGATTCCATTTGGGATAGGAAGAAGAGGATGTCCTGGAATCTCATTTGGGATCGCAGTGGTTGAATTAGTGCTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTTCCTGGAGTTAATACTACATCTGCACAAGACATAGACATGACTGAAACATATGGCGTCACTGTCACTAAGAAACTACCACTTCATGCTCAACCAACAATGCCACACTCATAA 1320 0.4235 MLLHLGQTPTLVVSSPDIAREIVKSHDVVFSNRPQTTPAKILLYGCKDVGFAPYGEEWRQKRKICVFELLSLKRVQCFQFIRKEEVEEMVNNIRGACESVINLSQMLITTSNNVMSRCVLGHKYEAPHGSSSFGDVARKAMTQIVASGVGDFFPSLGWIDYVTGLIPKLKATSAELDAFFENVIQQHKMMMKNNYEGEPCDYDRKDLVDILLQLRQDGMLDFELTNDDLKAILMDMFVGGSDTSSTTLEWAMAELLRNPTTMKKAQEEVRRVVDKKSKVEEKDVGEMKYLECVVKETLRLHPPVPLLLPRKTSSGVKLRGYNIPPKTNVYINAWAIQRDPEIWERPQEFVPERFENNEVDFKGQYFELIPFGIGRRGCPGISFGIAVVELVLANLLYWFDWKLPGVNTTSAQDIDMTETYGVTVTKKLPLHAQPTMPHS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1342 439 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 228 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 248 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 291 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 Coils Coil 262 282 - -
Sto3g1342 439 Pfam Cytochrome P450 3 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PANTHER CYTOCHROME P450 71B11-RELATED 1 436 - -
Sto3g1342 439 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 436 - -
Sto3g1342 439 Gene3D Cytochrome P450 1 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Sto3g1342 439 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS P450 superfamily signature 292 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1342 439 SUPERFAMILY Cytochrome P450 2 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1342 Sto-Chr3 9742883 9744295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1342 1 432 Cytochrome P450 AT3G48280 44.266 2.03e-129 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1342 K20617 - jre:108986000 545.043