Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1340 ATGAGTACTCTAGAACCAGTGTCGAAACACTTGCCATTTGAGCTAAATTCATCTAATTTTTGCCTCATTACCATCCTCATCATCGTCATCTCTGTGTTTAAGCTCACAAAAACAAGAACAAAGAAATCCAAAGTGCCTCCATCCCCTTTTAAATTACCTTTCATAGGCAATCTTCATCAGTTAGGCAAACTCCCACATCGCTCATTCCAAGCCCTCTCACGCAAATATGGGCCCCTCATGTTGCTCCACTTAGGGCAAACTCCGACTCTTGTGGTTTCTTCTCCAGATATCGCAAGAGAAATAGTCAAATCCCACGACGTCGTTTTCTCCAACCGCCCCCAAACTACCGCTGCCAAAATCTTCCTCTATGGATGCAAGAACGTGGGTTTCGCAGCCTATGGCGAAGAGTGGAGACAGAAGAGGAAAATCTGTGTTCTTGAACTTCTCAGCCTTAAAAGAGTTCAATCATTCGAGTTCATCAGAAAAGAGGAAGTTGAAGAGATGGTTAATAAGATAGGTGAATCATGCGAGAGCGAGAGTGTAATTAATCTCTCTCACATGATTATTACAACCTCCAACAACATTGTGTCGAGATGTGTTCTTGGGCACAAGTACGAGGCACCGCATGGTAGTAGTAGCTTTGGTGACGTGGCGAGGAAAGCGATGAGTCAATTCGTGGCCTTCAGTGTGGGAGATTTCTTCCCTTCTTTGGGATGGATTGACTATGTGACAGGACTCATTCCTAAACTGAAGGCCACTTCTGGAGAATTGGATGCTTTCTTTGAGGATGTGATTCAACAACATAAGATGATGAAAAGGAATCATGAAGATCATAGGCATGACTTTGTGGATATTCTCCTTCAACTCCAACAGGATGGCATGCTTGATTTTGAGCTCACCCACGATCACCTAAAAGCAATCATACTGgtgtctttctctctctctctctctctctttgccaaagATATGTACGTGGGAGGAAGTGACACAAGTTCGACAACGTTGGAGTGGGCCATGGCAGAGCTGTTGAGAAATCCAGCAATAATGAAGAAAGCCCAAGAAGAGGTAAGAAGAGTGGTGGACAAGAAATCAAAGGTAGAAGAAAAGGATGTGGGAGAAATGAAGTACTTGGAATGTGTAGTGAAAGAAACTATAAGATTACATCCTCCTGTTCCTCTTTTGCTtccaagaaaaacaagttcaaGTGTGAAGCTAAGAGGGTACAATATTCCCCCAAAGACAAACGTGTACATTAATGCTTGGGCTATTCAGAGAGACCCTGAAATTTGGGAGAGGCCAGAAGAATTCGTCCCAGAGAGATTTGAGAACAACGAGGTTGATTTTAGAGGCCAATATTTCGAATTGATTCCATTTGGGATAGGAAGAAGAGGATGTCCTGGAGTTTCATTTGGGATTGCAGTGGTTGAATTAGTGCTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTTCCTGAAGTTAATACTACATCTGCACAAGACATGGACATGAGTGAAACATATGGCGTTACTGTCACTAAGAAACTACCACTCCATGCTCAACCAACAATGCCACACTTATAA 1581 0.413 MSTLEPVSKHLPFELNSSNFCLITILIIVISVFKLTKTRTKKSKVPPSPFKLPFIGNLHQLGKLPHRSFQALSRKYGPLMLLHLGQTPTLVVSSPDIAREIVKSHDVVFSNRPQTTAAKIFLYGCKNVGFAAYGEEWRQKRKICVLELLSLKRVQSFEFIRKEEVEEMVNKIGESCESESVINLSHMIITTSNNIVSRCVLGHKYEAPHGSSSFGDVARKAMSQFVAFSVGDFFPSLGWIDYVTGLIPKLKATSGELDAFFEDVIQQHKMMKRNHEDHRHDFVDILLQLQQDGMLDFELTHDHLKAIILVSFSLSLSLFAKDMYVGGSDTSSTTLEWAMAELLRNPAIMKKAQEEVRRVVDKKSKVEEKDVGEMKYLECVVKETIRLHPPVPLLLPRKTSSSVKLRGYNIPPKTNVYINAWAIQRDPEIWERPEEFVPERFENNEVDFRGQYFELIPFGIGRRGCPGVSFGIAVVELVLANLLYWFDWKLPEVNTTSAQDMDMSETYGVTVTKKLPLHAQPTMPHL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1340 526 SUPERFAMILY Cytochrome P450 46 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Sto3g1340 526 PANTHER CYTOCHROME P450 71B11-RELATED 18 523 - -
Sto3g1340 526 Coils Coil 349 369 - -
Sto3g1340 526 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 18 523 - -
Sto3g1340 526 Gene3D Cytochrome P450 30 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1340 526 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1340 Sto-Chr3 9737579 9739624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1340 37 522 Cytochrome P450 AT3G48290 44.910 9.54e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1340 K20617 - jre:108986000 609.757