Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1331 ATGGAGATGGAACGCGTCTTTGAATTTCCTCATACTCACATGGATCGGCGCCCGAGGAAGAGGGCGCGATTGGGCTGGGACATCCCTGAGGCCCCAAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGGAATTTTTCAAGCTATGCACCATCAAGGGGACCCTCAGAACATACCAATAGTTCTCTAAATGTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGTGATGATGACAAAGATGGACATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACATAGCAAAATGGGTGAAGGAACGTTTGGGCAGGTCTTGGAGTGCTGGGACAGAGAAAGGAAGGAGATGGTTGCTATAAAAATTGTCCGTGGGATAAAAAAGTATCGGGAAGCAGCCATGATAGAGATTGAGGTGCTTCAACAGCTTGGTAAACATGATAAAGGTGGTAATCGTTGTGTTCAAATACGGAACTGGTTTGACTATCGTAATCATATATGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGCGAGATCGGCAGACAACTGTTGGAATGTGTAGCATTCATGCATGATTTGCGGATGATCCATACTGATTTGAAGCCGGAGAACATACTTCTCATTTCCCCGGAATATGTTAAAGTTCCGGATTACAGGAGTTCCTCAAGATCACCAAGTTCCTATTTCAAGAGAGTGCCAAAGTCAAGTGCTATCAAGGTTATTGATTTTGGCAGCACCACCTATGAGAGAGAAGATCAGAATTACATTGTGTCAACCCGGCATTATAGGGCACCAGAAGTTATACTTGGACAGTTTTGTTATGGTTTTTCAGGACTTGGATGGAGTTATCCATGTGATATATGGAGTGTGGGATGCATATTGGTTGAGTTATGCACGGGTGAAGCATTGTTTCAGACTCACGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGTCCGTTGCCTCAGCACATGTTGAAGAAAGCAGATCGACATGCTGACAAGTACGTTAGAAGGAGTAGATTAGACTGGCCGGAGGGTGCAACCTCAAGGGACAGTATTAAAGCTGTATTGAAGCTTCCTCGGCTTCAGAACCTAATAATGCAACACGTGGATCATTCGGCTGGAGATCTAATTCATGTCCTTCAAGGGTTACTCAGATATGATCCTTCAGAAAGACTATCGGCTAGGGAAGCACTTAGACATCCATTCTTTACGAGAGATCACCTTAGGAGATGA 1317 0.4389 MEMERVFEFPHTHMDRRPRKRARLGWDIPEAPKAQVGLFCGQDVGNFSSYAPSRGPSEHTNSSLNVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLISPEYVKVPDYRSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGQFCYGFSGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKKADRHADKYVRRSRLDWPEGATSRDSIKAVLKLPRLQNLIMQHVDHSAGDLIHVLQGLLRYDPSERLSAREALRHPFFTRDHLRR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1331 438 MobiDBLite consensus disorder prediction 50 78 - -
Sto3g1331 438 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 438 - -
Sto3g1331 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Sto3g1331 438 Gene3D Transferase(Phosphotransferase) domain 1 177 436 - -
Sto3g1331 438 PANTHER KINASE AFC1 1 438 - -
Sto3g1331 438 Pfam Protein kinase domain 98 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1331 438 SUPERFAMILY Protein kinase-like (PK-like) 85 435 IPR011009 -
Sto3g1331 438 MobiDBLite consensus disorder prediction 50 69 - -
Sto3g1331 438 Gene3D Phosphorylase Kinase; domain 1 72 176 - -
Sto3g1331 438 CDD PKc_CLK 85 431 - -
Sto3g1331 438 SMART serkin_6 98 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1331 438 ProSiteProfiles Protein kinase domain profile. 98 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1331 Sto-Chr3 9659255 9662659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1331 103 431 Core Cell Cycle Gene Families AT1G76540 25.664 3.22e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Sto3g1331 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1331 K08287 - gmx:100804452 830.476