Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1321 ATGGTGATCTCTAGCATCTTCCTTGTTTTCCTCactctcttcttcatcttctcacTGATCAAACACTCGAGAAAATCTGCTTCTTCAAAAAACAAtcatctccttcttcctcccGGTCCAACCGGGCTTCCTCTCATAGGCGCCCTCCACCTGCTCGACGATTTGCCTCACAGAACATTCCACAAACTCTCATCCCAATACGGCCCCCTCATGTTCTTGCGATTAGGATCCATACCCACTCTCGTCGTCTCCTCCTCCGACATAGCCACAGAGATCTTTAAGCACCACGACGCCGTTTTCTCAAGCCGGCCCGTCTTATACGCCGCCAAGAGACTCACCTATAACTGCTCTGCTCTGGCTTTCGCTCCTTACGGCCATTACTGGAGAGAAATCAGGAAGATTCTAATGCTGGAGCTTCTGAGTTCAAAGCGAGTTCAAGCATTTGAATCCGTGAGATCTCAAGAGATCAAGCTCTTCCTTCAGTCCATAGCAGCAGCTTCCGGTGATGACGATTCTTGCCCTGTGAATCTAAGCGAATTGACCCTTTTGCTGAGTAACAACATTGTGTGTAGAAGTGCTTTTGGGAGAAGAAGATGTAAGGAGGAAGAGGCTTATGCTAATTGTGCGGGGAGGTTTCAGGAGATGATGAGGGAAATGCAGGAGTTGTTTGGGGGGTTCTGTTTGGCTGATTTCTTTCCATGGTTGGGATGGGTTAACAAGTTCAATGGAATGGACGGTAGAATTAAAGAGAAAAATGACCCAAATCAAGCTATTTCACTCACCAATGACCAACTCAAGGGTGTGCTTGTGGACATTTTTATTGCAGGAACAGACACATCTTCAGCCACACTGGTTTGGACAATGGCTGAATTAATTCGGCACCCAGAAGTAATGAGAAGAGCACAAGAAGAAGTGAGAAAAGTAGGGAAGCATAAGGAGATGTTAGAAGAAAGTGATGTATCAAATCTCACATATCTCAAACTTGTAGTGAAAGAATCACTGAGGCTACACCCACCAACGCCACTCATTCTTCCCAGAGAAACCACACAAGCTTGCACCATCAAAGGGTTCCACATTCCAGCCAAAACGAGAGTGTTTGTGAATGCAAAAGCCATAGCCACAGATCCCAATGGAGGGTGGGAGAATCCATTGGAGTTTAAGCCAGAGAGGTTTCTGGAAAGTTCGGTGGATTATTACAAAGGGCAACGCTTTGAGATGTTGCCGTTTGGGGGTGGAAGGAGGGTGTGTCCGGGAGTGAACTTCGCTATGGCAATGATACAAGTTGCGTTGGCTAATCTTTTGTGTCGTTTTGAGTGGAAGCTTCCTAGTGAACAACTTGATATGGAAGAAGCATTTGGGATTACAATGCACAAGAAATCACCTCTTTGCCTTCTAGCTCGCCCTATACAAGTGTAG 1416 0.4477 MVISSIFLVFLTLFFIFSLIKHSRKSASSKNNHLLLPPGPTGLPLIGALHLLDDLPHRTFHKLSSQYGPLMFLRLGSIPTLVVSSSDIATEIFKHHDAVFSSRPVLYAAKRLTYNCSALAFAPYGHYWREIRKILMLELLSSKRVQAFESVRSQEIKLFLQSIAAASGDDDSCPVNLSELTLLLSNNIVCRSAFGRRRCKEEEAYANCAGRFQEMMREMQELFGGFCLADFFPWLGWVNKFNGMDGRIKEKNDPNQAISLTNDQLKGVLVDIFIAGTDTSSATLVWTMAELIRHPEVMRRAQEEVRKVGKHKEMLEESDVSNLTYLKLVVKESLRLHPPTPLILPRETTQACTIKGFHIPAKTRVFVNAKAIATDPNGGWENPLEFKPERFLESSVDYYKGQRFEMLPFGGGRRVCPGVNFAMAMIQVALANLLCRFEWKLPSEQLDMEEAFGITMHKKSPLCLLARPIQV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1321 471 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 SUPERFAMILY Cytochrome P450 37 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 Pfam Cytochrome P450 37 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 Pfam Cytochrome P450 245 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PANTHER CYTOCHROME P450 71A9 5 249 - -
Sto3g1321 471 PANTHER CYTOCHROME P450 71A9 252 470 - -
Sto3g1321 471 Gene3D Cytochrome P450 26 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PANTHER OS08G0105600 PROTEIN 5 249 - -
Sto3g1321 471 PANTHER OS08G0105600 PROTEIN 252 470 - -
Sto3g1321 471 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g1321 471 Coils Coil 298 318 - -
Sto3g1321 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1321 Sto-Chr3 9601629 9605158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1321 1 468 Cytochrome P450 AT3G48280 38.583 5.97e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1321 - K20617 fve:101292128 462.996