Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto3g1303 | ATGAGAATGGAGTCTTCTGAATCCCAATCAAGTGCAATTTCGAATTCCAACGAGAACCTAGAATTGGGCTTTCGTTCGGCACCATCGTTTCCTAATTCCGATCACGATACTGAAACGTCGGATCTTAATCACCAGGCTGAGGCCGATGCACTTCATGTGGAGTTCCCGAACAAGTTGGTTTTGAATGATAAGGAAGGAAGGGGCGAAACTGATAAAGAGGATTTTGAATTTGATGGTAGTGAAGAAGTATGTAATAAAGCTGATGCTGAGGAATCTGATAAGGGAGATGGGTGGAGTGAAGATGACGGGAATTGGAATGAAAATGAGGACGGTgattggaatgagaatgtaaacgacggtgatgatgatgagataGGTAGAGATTTTGATGTATCTGGAGATGAAGTGGAGAGGAGGGAAGAGAGAAGCAATGGTAGAAACCACCACTACCCTTTGAGGCCCGAAGCAGACGATTGTGCATTCTATCTTAAGACTGGAACTTGCAAGTTTGGGTTCTATTGCAAGTTTAATCACCCTGTTAGGAAGAAAGATCAGGCTGGTAAAGAGAAGGCAGGAGAGAGAGATGAATCAGCTGATAGAGCAGGACAGACAGAATGCAAGTATTATCTAACGTCAGGAGGTTGTAAGTTTGGAAAAGCCTGTAAATATAACCACACAAGGGGGAAATGTTCAGCATCACCAATTCTGGAGCTTAACTTTCTTGGTCTGCCTATTCGTCTGGGAGAGAAAGAGTGCCCCTATTACATGCGTACTGGTTCTTGTAAGTTTGGAGCAAGCTGCAAATTTAATCATCCAGATCCAACAACTGTTGGAGGAGGTGATCCTTCTACTGGATTTGGTAACGGTGGACCCATATCATTACAAAGCATTTCACAGCCATCTGTACCCTCCTGGTCTTCTCAAAGAACATTAAATGAAACTGCTGCTTATGTGCCGATGGTGCTTTCACCTACTCAAGGAGTTTCTCCAAGAAGTTCTGAATGGAATGGATATCAGtttCCACCATGCAATGCTATTAATATGACTACTGTTGATGCAGCTGGTAGCAAGTTCTTTCTGAAACCTGTTAAATTTACTTTTCTCTTGGGAAGGGATGGTGGGGAGAACATTTTGTTTCATTTACTACTGTTTGACCTGTCTCTTTTTTGTAAAAAGGCACCTCTTTACCTAGCTGAAAGGAGTATGCATCCACCTCCTGCATATGTCATGAACAATTCAGCAATTGAAACAAGTATTTTTATGCATCATCAAAAGCAGATGCAGGTTGAAGAGTTTCCCGAAAGACCTGGGGAACCTGAATGCAGTTACTTCTTAAAAACTGGAGATTGCAAGTTTAAATCTAGTTGTAAGTTTCACCATCCAAGGAATCGGATCACTAAGGTACCTCCAACATGCACCCTCAGTGACAAGGGACTTCCTTTGAGGCCTGATCAGAATATCTGCACGCATTACAGTCGCTATGGTATATGCAAATTTGGACCAGCTTGTAAGTTTGACCACCCAATAAACCCATCACCCTCAACTATGCCTGCAATTGATCAACAATCCTCCTACTCAAACTCAGCTACTGTAGAAGTGACTGGGATGGCTGGAAATGAGGGGCAAGTGATGCAATAA | 1638 | 0.4164 | MRMESSESQSSAISNSNENLELGFRSAPSFPNSDHDTETSDLNHQAEADALHVEFPNKLVLNDKEGRGETDKEDFEFDGSEEVCNKADAEESDKGDGWSEDDGNWNENEDGDWNENVNDGDDDEIGRDFDVSGDEVERREERSNGRNHHYPLRPEADDCAFYLKTGTCKFGFYCKFNHPVRKKDQAGKEKAGERDESADRAGQTECKYYLTSGGCKFGKACKYNHTRGKCSASPILELNFLGLPIRLGEKECPYYMRTGSCKFGASCKFNHPDPTTVGGGDPSTGFGNGGPISLQSISQPSVPSWSSQRTLNETAAYVPMVLSPTQGVSPRSSEWNGYQFPPCNAINMTTVDAAGSKFFLKPVKFTFLLGRDGGENILFHLLLFDLSLFCKKAPLYLAERSMHPPPAYVMNNSAIETSIFMHHQKQMQVEEFPERPGEPECSYFLKTGDCKFKSSCKFHHPRNRITKVPPTCTLSDKGLPLRPDQNICTHYSRYGICKFGPACKFDHPINPSPSTMPAIDQQSSYSNSATVEVTGMAGNEGQVMQ | 545 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto3g1303 | 545 | PANTHER | PROTEIN PHOSPHATASE RELATED | 392 | 543 | - | - | |
Sto3g1303 | 545 | PANTHER | PROTEIN PHOSPHATASE RELATED | 9 | 341 | - | - | |
Sto3g1303 | 545 | ProSiteProfiles | Zinc finger C3H1-type profile. | 153 | 181 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | SMART | c3hfinal6 | 482 | 509 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | SMART | c3hfinal6 | 153 | 180 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | SMART | c3hfinal6 | 200 | 227 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | SMART | c3hfinal6 | 246 | 273 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | SMART | c3hfinal6 | 435 | 462 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | ProSiteProfiles | Zinc finger C3H1-type profile. | 482 | 510 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | Gene3D | - | 480 | 530 | - | - | |
Sto3g1303 | 545 | Gene3D | - | 414 | 474 | - | - | |
Sto3g1303 | 545 | Gene3D | - | 195 | 279 | - | - | |
Sto3g1303 | 545 | SUPERFAMILY | CCCH zinc finger | 480 | 508 | IPR036855 | GO:0046872 | |
Sto3g1303 | 545 | SUPERFAMILY | CCCH zinc finger | 440 | 465 | IPR036855 | GO:0046872 | |
Sto3g1303 | 545 | ProSiteProfiles | Zinc finger C3H1-type profile. | 246 | 274 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Sto3g1303 | 545 | MobiDBLite | consensus disorder prediction | 131 | 150 | - | - | |
Sto3g1303 | 545 | Gene3D | - | 130 | 189 | - | - | |
Sto3g1303 | 545 | MobiDBLite | consensus disorder prediction | 102 | 130 | - | - | |
Sto3g1303 | 545 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 158 | 179 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 437 | 462 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 249 | 272 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 485 | 508 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 203 | 225 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | MobiDBLite | consensus disorder prediction | 58 | 101 | - | - | |
Sto3g1303 | 545 | ProSiteProfiles | Zinc finger C3H1-type profile. | 435 | 463 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | ProSiteProfiles | Zinc finger C3H1-type profile. | 200 | 228 | IPR000571 | GO:0046872 | |
Sto3g1303 | 545 | PANTHER | TRANSCRIPTION FACTOR C3H FAMILY-RELATED | 392 | 543 | - | - | |
Sto3g1303 | 545 | PANTHER | TRANSCRIPTION FACTOR C3H FAMILY-RELATED | 9 | 341 | - | - | |
Sto3g1303 | 545 | MobiDBLite | consensus disorder prediction | 1 | 150 | - | - | |
Sto3g1303 | 545 | SUPERFAMILY | CCCH zinc finger | 247 | 273 | IPR036855 | GO:0046872 | |
Sto3g1303 | 545 | SUPERFAMILY | CCCH zinc finger | 153 | 181 | IPR036855 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto3g1303 | Sto-Chr3 | 9458737 | 9462933 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto3g1303 | 426 | 511 | C2H2 Transcription Factor Family | AT5G18550 | 43.956 | 8.73e-20 | 90.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Sto3g1303 | zf-CCCH | 1.5e-08 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto3g1303 | - | - | gmx:100786894 | 594.734 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Sto3g1303 | 3 | 9458737 | 9462933 | Sto12g0703 | 12 | 4446823 | 4459117 | ECH | |
Sto3g1303 | 3 | 9458737 | 9462933 | Sto3g1303 | 3 | 9458737 | 9462933 | ECH |