Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1283 TTGAACAAAGAGGGTGAGCTGAAAATTTGTGACTTTGGGTTATCTCGCCAATATGGAAGTCCACTAAAGCCTTATACCCCTGTTGTGGTGACTCTTTGGTACAGAGCTCCTGAGTTACTGTTGGGTGCTAAAGAATATTCAACTGCAATAGACATGTGGTCCGTGGGTTGTATTATGGCTGAATTAGTTGCTAAGGTCCCTCTCTTCATGGGAAAATCTGAAGTTGAACAAATTAATAAGATTTTCCAAACTCTGGGCACACCCGATGAGAAAGTTTGGCCTGGATTAACCCAATTACCTGGATCCAAGGGAAGATTTGTTAAGCAACCGTACAACCTGTTGCGGAAAAAGTTTCCAGTTGCATCTTTTACTGGATCCCCTTTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAACTTCTAACTTACGACCCTGAAAAGAGGATAACTGCCGAAGATGCCCTTCTTCATGATTGGTTCCACGAAGACCCTCTTCCTAAATTCGACTTCCAACCTACTTCTCTTTCACAGCATTGCTAG 540 0.4241 LNKEGELKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELVAKVPLFMGKSEVEQINKIFQTLGTPDEKVWPGLTQLPGSKGRFVKQPYNLLRKKFPVASFTGSPFLSELGFDLLSKLLTYDPEKRITAEDALLHDWFHEDPLPKFDFQPTSLSQHC 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1283 179 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1283 179 PANTHER CELL DIVISION PROTEIN KINASE 1 172 - -
Sto3g1283 179 PANTHER CYCLIN-DEPENDENT KINASE 1 172 - -
Sto3g1283 179 Pfam Protein kinase domain 2 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1283 179 Gene3D Transferase(Phosphotransferase) domain 1 2 160 - -
Sto3g1283 179 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1283 179 SUPERFAMILY Protein kinase-like (PK-like) 1 166 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1283 Sto-Chr3 9298787 9299795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1283 7 164 Core Cell Cycle Gene Families AT1G20930 49.367 2.74e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Sto3g1283 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1283 K08818 - gmx:100814438 309.301