Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1267 ATGGCAGTCGCATTCCATGATGTTAACTCTGCTTCTGGGTTGAAAAAGCTCGATGATTACCTTCTCTCCCGTAGTTATATCACTGGGTACCAAGCTTCAAAGGACGATGTTACAGTATATGCAGCCCTATCAAAGGCTCCATCCGCTGAATATGTTAATGTGTCCCGGTGTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTTGAAGGATCTGTTCCCATAACAGAGGAGACTGTTGCTACTCCCCCACCTGCTGACACAAAGGCATTTGCTTTCCTCTCTTCTTTTGGGTTCTTATATTTATGTTGCCTGATTATACTTCAACTGGAGacagaggaggagaagaaggctGCTGAAGAACGTGCAGCTGCTGTGAAGGCATctacaaaaaagaaagagtCTGGGAAGTCATCTGTCTTGCTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCTGTGAGGAGTGTTCAGATGGAAGGGTTGCTTTGGGGTGCTTCCAAACTTGTCCCTGTTGGGTATGGTATCAAGAAAATGCAAATTATGCTTACTATTGTCGACGACCTGGTCTCAGTAGACACCCTCATTGAGGAACGTCTCACGTGTGAGCCAATTAACGAATATGTTCAGAGCTGTGACATTGTTGCCTTCAACAAAATCTGTAAGTATTTTGAAgtctttgtttatttttag 708 0.4124 MAVAFHDVNSASGLKKLDDYLLSRSYITGYQASKDDVTVYAALSKAPSAEYVNVSRCGVSGEGSGVTVEGSVPITEETVATPPPADTKAFAFLSSFGFLYLCCLIILQLETEEEKKAAEERAAAVKASTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKMQIMLTIVDDLVSVDTLIEERLTCEPINEYVQSCDIVAFNKICKYFEVFVYF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1267 235 CDD EF1B 134 225 IPR014038 GO:0003746|GO:0006414
Sto3g1267 235 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 230 - -
Sto3g1267 235 Pfam EF-1 guanine nucleotide exchange domain 138 225 IPR014038 GO:0003746|GO:0006414
Sto3g1267 235 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 230 - -
Sto3g1267 235 Gene3D - 129 225 IPR014717 -
Sto3g1267 235 Coils Coil 108 128 - -
Sto3g1267 235 SUPERFAMILY GST C-terminal domain-like 9 56 IPR036282 -
Sto3g1267 235 SUPERFAMILY eEF-1beta-like 133 225 IPR036219 -
Sto3g1267 235 SMART EF1_GNE_2 136 225 IPR014038 GO:0003746|GO:0006414
Sto3g1267 235 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 214 225 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1267 Sto-Chr3 9192945 9194588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1267 4 225 Eukaryotic Initiation Factors Gene Family AT2G18110 72.532 6.02e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1267 K03232 - pvy:116120737 310.071