Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1259 ATGGTCTCCAGCGCCGCCGCCAGCTACGCCCTGGCCCTCGCCGACGTCGCCAAGGCCAACAACACGCTCGACGCCACCACCGCCGACATCGAGAAAATCGAGGAGATCTTCAGCGATCCCGGCGTGTTCGACTTCTTCAACAACCCTACCGTAGACACGGAGAAGAAGCAGAGCGTAATCGAGGAAATCGCGACCTCCTCGAGCCTCCAGCCACACACTCGCAACTTCCTCTACATCCTGGTGGACGCGAAGAGGATCGATCTGATCAACGAAATCACGAAGGAGTACGAGTTCGTGTACAATACCTTGACGGACACAGAGATGGCGGTTGTGAGCTCGGTGGTGAAATTGGAGTCGCAGCATCTGGCTCAGATCGCGAAGCAGGTGCAGAAACTGACGGGGGCGAAGAACGTGAGGATCAAGACCGTGATTGATCCGAGTTTGGTGGCTGGATTCACAATCAGGTATGGGAATTCGGGATCCAAGTTGATTGATATGAGCGTGAAGAAGCAGCTCGAGGAAATTGCTGCTCAGCTTGATTTGGGCGATATCACACTCACCTGTGTACGAACCAGAGATTCTTGCACTTAG 591 0.5448 MVSSAAASYALALADVAKANNTLDATTADIEKIEEIFSDPGVFDFFNNPTVDTEKKQSVIEEIATSSSLQPHTRNFLYILVDAKRIDLINEITKEYEFVYNTLTDTEMAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDITLTCVRTRDSCT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1259 196 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 138 157 IPR020781 GO:0015986|GO:0016020|GO:0046933
Sto3g1259 196 PANTHER BNACNNG66500D PROTEIN 1 187 - -
Sto3g1259 196 PRINTS ATP synthase delta subunit signature 5 24 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 PRINTS ATP synthase delta subunit signature 74 85 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 PRINTS ATP synthase delta subunit signature 85 99 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 PRINTS ATP synthase delta subunit signature 136 151 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 PRINTS ATP synthase delta subunit signature 154 172 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 Pfam ATP synthase delta (OSCP) subunit 6 179 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 3 104 IPR026015 -
Sto3g1259 196 Hamap ATP synthase subunit delta [atpD]. 1 181 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 Gene3D - 5 97 IPR026015 -
Sto3g1259 196 Coils Coil 16 36 - -
Sto3g1259 196 PANTHER ATP SYNTHASE DELTA CHAIN 1 187 IPR000711 GO:0015986|GO:0046933
Sto3g1259 196 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 6 179 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1259 Sto-Chr3 9119234 9119923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1259 1 186 Primary Pumps ATPases AT4G09650 69.892 6.14e-93 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1259 K02113 - jre:108995257 283.493