Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1258 ATGGAAAGTTCGAAGGACAAGAGAGTAGAGAAGAGAGGGTACGAGCTGGTTGAGGGTGCTGATGAGCATCTATCACAATCAAAGAAGCCAAAACTTCCTGGTTTGGCAAgTGTAATCGTGGAGGCTTTGAAAGTGGATAGTTTGCAAAGACTTTGCTCATCTTTGGAACCCCTTCTCAGGAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCGAAACTAAGCCCTGCTAAATTGACTGGAAATGGAAGATCCCCACCACCAAGAATTGAAGGGCCAGGGGCAAAGAATCTGCAGATTCATTTCAAAACAAGAATGCCGCCTCACTTGTTCACAGGTGGAAAGGTAGAGGGAGAGCAAGGAGGGTCCATTCATGTCGTCCTTCTAGACCCAAACACAGGCCATGTGGTTCAAACCGGACCAGAATCGAGTGCTAAATTGACTGTTGTGGTACTTGAAGGTGACTTTAATGAGGAATCTGATGATGAGTGGACAAAAGAGCACTTTGAAAGCCATGAAGTAAAGGAGAGGGAGGGGAAACGGCCACTTCTAACTGGAGATTTGCAGGTTATACTAAAGGAAGGGGTGGGAACCTTGGGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGGAGCAGAAAATTCAGGCTTGGTGTGAAGGTAGCTCCTGGTTCTTGTGAGGAGATCCGTGTTAGAGAGGGGAAGACTGAGGCATTTGCTGTCAAAGATCATAGAGGAGAATTATACAAGAAACACTATCCACCTGCTTTGCATGATGAAGTTTGGAGATTAGATCGCATAGCAAAGGATGGGGCACTGCACAAAAAATTGATTCAAGCAAAAATAGTAACTGTAGAGGATTTCCTCCGTGTTCTAGTCAGGGACCCACAGAAGTTGAGAAGTATACTTGGAAGTGGAATGTCCAACAGGATGTGGGAGAATACCGTGGAGCATGCCAAGACATGTGTCTTGGGTAGTAAGCTCTTTGTTTACTATACCGATGGGGCCAATAACGCCGGTATTGTGTTCAATGATATATACGAGCTGAGAGGCCTTATTGCTGATGGGCAGTTCTTCTCTTTGGAATCACTTGCACCAAATCAGAAGATGTCTGTGGATACATTGGTGAAGAAAGCATATGAAAATTGGAACCAGGTAGTAGAATATGATGGAAAAGTTCTAACTTCTCTTACAAATACCAAAAATGGAGCAAGATCTCTACCCCCACCTATAATGCATCACAATAACTATGTCACAGAGCAGCAGTATCTTTCTCCAAAGAACAGGCTGCAGTATGTCTCCGGCTCCGCTGAACCGAATCAACATTTGCAAATAAAAAACAACCACTCCTTAGCAGCTGATAATCATATGTTAGGGACAGCGTCAAATGACTCCCAATTAACGTTGTCCAGCAGCATGGGTTACATAGCAAGTGAGAATCCTGCAGTCGAAGGTACATACTTTCCGGGAGACTGGTCTCGGCAACGAAGTGGGCAAGGATTGGAAGACATTGTGGCCGAAGAAATCCGTCTTAGGAGTTCGGAGATGTTGGAGGGTGATGATATGCAGAGGTTGCTCAAGACAATCAATGCTGGTTTTGGTCATCCTAATGAGGGCTGTTATTCCTACAGTTTACAGTATGAACCTCAGATGTATCAAACTTTCAGTGAGGATAGTGGGAAAACTTCAGGGAAGGCTGTGGTTGGGTGGCTTAAGCTTAAAGCTGCTCTACGGTGGGGAATATTTATCAGAAAAAAAGCTGCAGAAAGGAGAGCACAGCTTACTGAGTTGAATTGA 1800 0.4444 MESSKDKRVEKRGYELVEGADEHLSQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLSPAKLTGNGRSPPPRIEGPGAKNLQIHFKTRMPPHLFTGGKVEGEQGGSIHVVLLDPNTGHVVQTGPESSAKLTVVVLEGDFNEESDDEWTKEHFESHEVKEREGKRPLLTGDLQVILKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVAPGSCEEIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRVLVRDPQKLRSILGSGMSNRMWENTVEHAKTCVLGSKLFVYYTDGANNAGIVFNDIYELRGLIADGQFFSLESLAPNQKMSVDTLVKKAYENWNQVVEYDGKVLTSLTNTKNGARSLPPPIMHHNNYVTEQQYLSPKNRLQYVSGSAEPNQHLQIKNNHSLAADNHMLGTASNDSQLTLSSSMGYIASENPAVEGTYFPGDWSRQRSGQGLEDIVAEEIRLRSSEMLEGDDMQRLLKTINAGFGHPNEGCYSYSLQYEPQMYQTFSEDSGKTSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1258 599 PANTHER OS02G0177800 PROTEIN 416 598 IPR012416 GO:0005516
Sto3g1258 599 PANTHER OS02G0177800 PROTEIN 9 403 IPR012416 GO:0005516
Sto3g1258 599 MobiDBLite consensus disorder prediction 1 31 - -
Sto3g1258 599 Pfam Calmodulin binding protein-like N-terminal domain 98 245 IPR046831 -
Sto3g1258 599 Pfam Calmodulin binding protein central domain 257 323 IPR046830 -
Sto3g1258 599 PANTHER OS02G0562300 PROTEIN 416 598 - -
Sto3g1258 599 PANTHER OS02G0562300 PROTEIN 9 403 - -
Sto3g1258 599 MobiDBLite consensus disorder prediction 1 28 - -
Sto3g1258 599 Pfam Calmodulin binding protein C-terminal domain 328 390 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1258 Sto-Chr3 9112853 9116760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1258 9 599 Calmodulin-binding Proteins AT2G24300 61.765 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1258 - - gmx:100775528 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1258 3 9112853 9116760 Sto3g1258 3 9112853 9116760 ECH