Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1246 ATGGGTGACAAAGTTAAAGCCGACTCTGTTCATTCCTCTGTGCTCCACGGGAAGTACGAGCTCGGTCGCCTTCTAGGTCACGGCACTTTCGCCAAAGTCTACCATGCGAAGAATCTGCAGAGCGGGATGATGGAGCAGATTAAGAGAGAGATCTCCGTGATGAAGATGGTGAAACATCCCAATATCGTCGACCTTCACGAGGTTATGGCCAGCAAATCCAAGATCTACATCGCCATGGAGCTCGTTCGAGGCGGCGAGCTCTTCAATAAGATCGCTAGAGGCCGCTTGAGAGAAGACGTCGCGAGGCTTTATTTCCAGCAATTGATCTCCGCCATCGATTTCTGCCATAGCCGTGGCGTTTACCACCGAGATCTGAAACCTGAGAATCTGTTACTCGACGAGGATGGGAATTTGAAGGTCACCGATTTCGGCCTCAGCACCTTCTCGGAACACCTGCGGCAAGACGGGCTGCTGCATACGACGTGCGGCACTCCGGCGTACGTTTCGCCGGAGGTAATCGGAAAGAAAGGCTACGACGGCGCCAAGGCGGATATCTGGTCCTGTGGAGTCATTCTGTATGTGCTTCTGGCGGGATTCTTGCCCTTCCAGGACGATAACCTCGTGGCCATGTACAGGAAAATCTACCGAGGCGACTTCAAATGCCCGCCGTGGTTCTCCTCGGAAGCTCGGCGGCTAATCACGAAGCTTCTGGACCCGAATCCCAACACTCGAATAACGATTTCCAAGATAATGGAGTCGTCGTGGTTCAAGAAATCGATCCCGAGAAGCGTGATGACGAAGGCGGAGCAGGAATTCGAGATGGACAGCGAGAAGTTGAAGCTGCAGCAACCCACAACGATGAACGCGTTCCACATAATATCGCTCTCGGAGGGGTTCGACTTGTCGCCTCTGTTCgaggagaagaagagggaggagaaggaggagatGAGATTCGCGACGACGAGGCCAGCAAGCAGCGTGATATCGAGGCTGGAGGAAGTGGCGAAGGCGGAGAGATTCAACGTGAAGAAGAGCGAGACGAAGGTGAGGTTGCAGAGGCAGGAATGCGGAAGAAAAGGGAAGCTGGCAATTGCGGCGGATATATACGCCGTGACGCCGTCGTTTTTGGTGGTGGAGGTGAAGAAAGACAACGGTGACACCTTGGAATACAATCAATTCTGCAGTAAGGAGCTTCGTCCTGCTCTGAAAGACATCGTGTGGACGACGACGTCGCTGCCTGAAAACTCCACACCTGCTTGA 1260 0.5214 MGDKVKADSVHSSVLHGKYELGRLLGHGTFAKVYHAKNLQSGMMEQIKREISVMKMVKHPNIVDLHEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARLYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVSPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMESSWFKKSIPRSVMTKAEQEFEMDSEKLKLQQPTTMNAFHIISLSEGFDLSPLFEEKKREEKEEMRFATTRPASSVISRLEEVAKAERFNVKKSETKVRLQRQECGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWTTTSLPENSTPA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1246 419 SUPERFAMILY Protein kinase-like (PK-like) 15 273 IPR011009 -
Sto3g1246 419 Pfam NAF domain 284 344 IPR004041 GO:0007165
Sto3g1246 419 SMART serkin_6 19 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1246 419 ProSiteProfiles NAF domain profile. 282 306 IPR018451 GO:0007165
Sto3g1246 419 PANTHER - 10 416 - -
Sto3g1246 419 ProSiteProfiles Protein kinase domain profile. 19 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1246 419 Gene3D Phosphorylase Kinase; domain 1 28 86 - -
Sto3g1246 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Sto3g1246 419 ProSitePatterns Protein kinases ATP-binding region signature. 25 55 IPR017441 GO:0005524
Sto3g1246 419 Gene3D Kinase associated domain 1, KA1 282 408 - -
Sto3g1246 419 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 416 - -
Sto3g1246 419 Pfam Protein kinase domain 32 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1246 419 Gene3D Transferase(Phosphotransferase) domain 1 87 262 - -
Sto3g1246 419 CDD CIPK_C 288 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1246 Sto-Chr3 9013732 9015042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1246 12 410 CBL-interacting serine-threonine protein kinases AT4G30960 73.113 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto3g1246 Pkinase 5.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1246 - K07198 tcc:18587859 706.442