Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1241 ATGACCTTGCTCCGTAAATTGTTCTTTCGGAAGCCTCCCGATGGGCTTCTTGAGATCTGCGAGAGAGTTTATGTTTTTGATTGCTGCTTCACGACGGATTCTTGGAAAGAAGAAAACTATAAAGTCTACATGGACGGGATTGTTAGTCAACTTCGAGAGCACTTGCCTGATGCTTCGATCTTGGTCTTCAATTTCCGTGAGGAAGAAACTAAGAGTCAGATGGCTAACATTATGTCTGAGTTTGACATAACTATTATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTTAAAATGGAAGTCATCCACCACTTTTTAAGGTCCGGTGAAAGTTGGCTCTCGCTTGGGCAGCATAATGTGCTGTTGATGCATTGTGAACGTGGTGGTTGGCCAGTTTTGGCTTTCATGCTGGCTGCACTCTTGATTTTCCGGAAGCAATATAGCGGAGAACAAAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCATTTGTTGACTCCATTGAATCCAATCCCTTCCCAACTGCGGTATCTGCAGTATGTTTCAAGGAGAAATGTGGCCATAGATTGGCCTCCGTTAGACAGGGCGCTGACTTTGGACTGCATCATTCTCAGATTTATCCCAAACTTCGATGGGGAAGGTGGATGTCGTCCAATTTTTCGAATTTATGGACAGGACCCTTTTGTTGCAGATAAAACCCCGAAAGTCCTGTACTCAacaccaaagaaaaataaaatcgtCCGAGCTTACAAGCAGGGAGAGTGTGaactaattaaaattgatatcaACTGCCATATCCAAGGTGATGTTGTGATTGAGAGCATTAATTTGAACAGTGACATGGACGGGGAACAGATGATGTTTCGAGTCATGTTCAACACAGCTTTTATTAGGTCTAATATACTGATGCTTAACCGGGATGAAGTTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAGGATTTCAGGGCAGAGATCCTTTTCTCAGAAATGGATGCTGCTGCCGCTGTCATAGCTGATGGTACCTCATGCTTTGGGGAAAAGGAGGGCCTGCCAGTGGAAGCATTTGCTAAAGTTCAAGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCAGATGTTGCTCTAAATGTACTCCAACAGATGAGTGCTACAGCTATCATACATGACAAGTTGGATGCAAGTTCTGCACAGCACGCTGATACTGGATCTTTGTTGCATGAAACAGATCCTAAAGTGCCTCAAGGGAAAAAGAATGAAGCAAAATCATTATTGTTGTCAAATTTGGAATTCCAATCCAATGCCTCAACTAACTCCACATCTGGAGCTCCATTATCAAGTACCTTTCCAACTTCAGCAACTCCATCAACTCAGCCACCTCCTCCCCCTACAACTCCTCCGAAGGAGATTCTACCTGTAAGAACTAAACCTGCTCTGCCCACTTCACAACCTCCAACACCACCTACTCCCCCAACACCTCCTCTAAAGGAGCATAAACTGGTTAGAGCCATACCCCCATCTCCACCTCCACAGAAAGCGCAGCCACTGGTTCGAGCCCCTCCCCCTCCACCACCTCCTCTGAAGGAGAAGCCACAAGTTAGACCTGCACCCCCTCCTCCCCCACCACCTCCTCTAAAGGAGGAGCCACCTATTAGAGCTagacctcctcctcctccaccaccacctcctCTTTCTGCGAAAGCTGCAGATCTTAGTATAgcaccgccaccaccaccaccacctcctgCTGCAGCACTTTCCTTCAAGCACCCTACTCCTTCATCCTCACCTGTTCCCGCTGCTCCTAATGCTCCACCACCTCCAGCCCCCTTTGTGCATTGGTTGAAAATATCCAGAGCAGTACAAGGAAGTTTGTGGGCAGAGGCACAGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTTCCAAGTTCAGATCCTGCCAAGAAATCAGGCGTCAACAGCTCAGTTGGGGCTAAATCTGAAAAAGTGCAACTGATTGAGCACAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTTAAAGTGCCATTGCATGATTTGATGAGCTCAGTGCTAGCACTAGAAGACTCAGCACTAGACATTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACGAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTTTTCCTAGAGTTGATGAAAGTACCACGGGTGGAATGCAAGCTCAGAGTTTTTTCCTTCAAGATTCAGTTCCATTCTcaggTTTCTGACCTCAGAAAAAGCCTGACTATTGTAAATGCTGCTGTAGAAGAGATAAAGAATTCTGTCAAATTGAAGAGAATTATGCAGACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCCAGGGGTTCTGCAATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGACACGTGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGATCAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTCGAGCCTGCAGTGAAGATCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTGGAGAAAGTTATCCAGGAACTTTCGATCTCTGAAAATGATGGTCCTATATCAGAAACATTCCGCAAGaattTGAAAGAGTTCCTCTGTTCTGCTGAAGCTGAAGTTCGATCATTGGCATCATTATATTCTGGCGTGGTAGGCCTTTAa 2847 0.4334 MTLLRKLFFRKPPDGLLEICERVYVFDCCFTTDSWKEENYKVYMDGIVSQLREHLPDASILVFNFREEETKSQMANIMSEFDITIMDYPRQYEGCPVLKMEVIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIFRKQYSGEQRTLDMVYRQAPRELLHLLTPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPFVADKTPKVLYSTPKKNKIVRAYKQGECELIKIDINCHIQGDVVIESINLNSDMDGEQMMFRVMFNTAFIRSNILMLNRDEVDILWDAKDHFPKDFRAEILFSEMDAAAAVIADGTSCFGEKEGLPVEAFAKVQEIFNHVDWLNPKADVALNVLQQMSATAIIHDKLDASSAQHADTGSLLHETDPKVPQGKKNEAKSLLLSNLEFQSNASTNSTSGAPLSSTFPTSATPSTQPPPPPTTPPKEILPVRTKPALPTSQPPTPPTPPTPPLKEHKLVRAIPPSPPPQKAQPLVRAPPPPPPPLKEKPQVRPAPPPPPPPPLKEEPPIRARPPPPPPPPPLSAKAADLSIAPPPPPPPPAAALSFKHPTPSSSPVPAAPNAPPPPAPFVHWLKISRAVQGSLWAEAQKSGEASKAPEIDMSELESLFSAAVPSSDPAKKSGVNSSVGAKSEKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVECKLRVFSFKIQFHSQVSDLRKSLTIVNAAVEEIKNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADQLPEVLDFSKDLANLEPAVKIQLKFLAEEMQAISKGLEKVIQELSISENDGPISETFRKNLKEFLCSAEAEVRSLASLYSGVVGL 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1241 948 Gene3D - 198 340 - -
Sto3g1241 948 Gene3D Protein tyrosine phosphatase superfamily 15 197 IPR029021 -
Sto3g1241 948 SMART it6_source 606 948 IPR015425 -
Sto3g1241 948 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Sto3g1241 948 SUPERFAMILY Formin homology 2 domain (FH2 domain) 613 943 - -
Sto3g1241 948 MobiDBLite consensus disorder prediction 461 477 - -
Sto3g1241 948 MobiDBLite consensus disorder prediction 441 612 - -
Sto3g1241 948 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Sto3g1241 948 MobiDBLite consensus disorder prediction 441 460 - -
Sto3g1241 948 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Sto3g1241 948 MobiDBLite consensus disorder prediction 510 594 - -
Sto3g1241 948 PANTHER FORMIN-J 1 945 - -
Sto3g1241 948 ProSiteProfiles Formin homology-2 (FH2) domain profile. 606 948 IPR015425 -
Sto3g1241 948 SMART PTEN_C2_2 197 336 IPR014020 -
Sto3g1241 948 MobiDBLite consensus disorder prediction 485 502 - -
Sto3g1241 948 Pfam Formin Homology 2 Domain 613 943 IPR015425 -
Sto3g1241 948 Gene3D Formin, FH2 domain 605 946 IPR042201 -
Sto3g1241 948 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1241 Sto-Chr3 8962173 8969714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1241 1 404 Protein tyrosine phosphatase (PTP) family AT5G58160 68.889 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1241 - - han:110941198 940.258