Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1234 ATGGCTGAGCGTGAGAGCTTGGAAGCTCCCGAGGAGGAAAACCCAGAGCTAGAGAAGCCACAAGAGAAGAAATCGGAAGAAGGGGCAAAAGTGGAACAAAAACGAGCGTCTGAGACACAGCCCTGTGAGTTACGGAGTTCTAAACCTCCCGATGAAGCAGAGACCAGAGAGCCTAATTCGGGAACCCTAGCTGTGCCTGCTTCGGTTGAACTTGAACCCGTAGTGAAAGATCAGAGTGATGATTTGAAGGCGAGCTCTACTACGCAGGATGCTGTAAAAGACGAAAGTAAGGAGCCAGTTGGACCTCCTGATGAAGAACATAACCCAAAAGAAGCAGTCCAGGTAGCTCAAACTCAGATAGAAAATCAACTTCAGGTGTCAGTGTGTTCAAATCCATTGTCTGAACAATCACCAACATCTGTTACTCAATCTTTATCATCTGCTCCTAGCCCCACTGTACCAGAACAAAAACTGTCTACCCCAAAGGTTGACAATGTGCATGTGCGAGAGGTAGACAAGAAAAAGCCTTCTCATCGTAATACACTATCTCCTGTTTCTGTTGTGAGGACATCTGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGCCCTACAGGCCATGTTGTAGAGGTTGTTTATAAAAGTCAACACAGCCATGATCCACCACAGAAGACTAGCTCCACAAGAGAAAGCAAGTTTGCATCATCCAAACAACCTACTGTAGAGAACAGTGTTCCAGAGCAGCCCATCAGATTGCTCAATGATTCAAATCCATGCCCTTCTTCAAAAGAACCTCCACAAGAAGCACCGTGCACTGCTGATAAGAAGCGACAAAACTCCTCTGATCTCAGTGAGAATGCGGGGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGCCAGAAAATGGTGAAGGGAAATCCTCATCCCAGAAACTACTACAGATGCACATCTGCCGGTTGTCCTGTCCGTAAGCACATAGAGACTGCTGTAGATAACTCAAATGCTGTAATCATTACATATAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCACGGTCCGCCAAGTGCTCCTCTTGTGGCCGCTGCAGCACCTGCTTCAATGAACAATTCACAGCAGTTCAAAAAAACCGATACACAGCAAAACCAAAAATCTTCAACTCAGTGGTCCGTAGACACCGAAGGAGAATTGACTGGAGAAGCCTTGGAGCTCGGAGGTGAGAAAGCGATGGAGTCGGCTCGAACTCTCTTGAGCATTGGTTTTGAAATTAAGCCTTGTTGA 1317 0.4685 MAERESLEAPEEENPELEKPQEKKSEEGAKVEQKRASETQPCELRSSKPPDEAETREPNSGTLAVPASVELEPVVKDQSDDLKASSTTQDAVKDESKEPVGPPDEEHNPKEAVQVAQTQIENQLQVSVCSNPLSEQSPTSVTQSLSSAPSPTVPEQKLSTPKVDNVHVREVDKKKPSHRNTLSPVSVVRTSASDGYNWRKYGQKQVKSPTGHVVEVVYKSQHSHDPPQKTSSTRESKFASSKQPTVENSVPEQPIRLLNDSNPCPSSKEPPQEAPCTADKKRQNSSDLSENAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNSQQFKKTDTQQNQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1234 438 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 292 436 - -
Sto3g1234 438 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 21 291 - -
Sto3g1234 438 MobiDBLite consensus disorder prediction 162 179 - -
Sto3g1234 438 MobiDBLite consensus disorder prediction 278 292 - -
Sto3g1234 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 291 IPR044810 GO:0003700
Sto3g1234 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 292 436 IPR044810 GO:0003700
Sto3g1234 438 SUPERFAMILY WRKY DNA-binding domain 295 358 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 SMART WRKY_cls 192 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 SMART WRKY_cls 298 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 MobiDBLite consensus disorder prediction 223 267 - -
Sto3g1234 438 Pfam WRKY DNA -binding domain 300 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 MobiDBLite consensus disorder prediction 376 406 - -
Sto3g1234 438 MobiDBLite consensus disorder prediction 1 55 - -
Sto3g1234 438 MobiDBLite consensus disorder prediction 1 301 - -
Sto3g1234 438 MobiDBLite consensus disorder prediction 87 111 - -
Sto3g1234 438 Gene3D WRKY domain 183 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 MobiDBLite consensus disorder prediction 377 406 - -
Sto3g1234 438 ProSiteProfiles WRKY domain profile. 293 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 MobiDBLite consensus disorder prediction 112 159 - -
Sto3g1234 438 MobiDBLite consensus disorder prediction 180 198 - -
Sto3g1234 438 Gene3D WRKY domain 284 359 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g1234 438 SUPERFAMILY WRKY DNA-binding domain 190 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1234 Sto-Chr3 8909888 8915963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1234 90 438 WRKY Transcription Factor Family AT4G30935 46.455 1.39e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto3g1234 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1234 - - gmx:100127377 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1234 3 8909888 8915963 Sto3g1234 3 8909888 8915963 ECH