Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1227 ATGATATCTGATCAATCATACTCAACTATCCTCAAATACTGCAATTTCACAGCAGATAAGACATCTAAAATATGTGATGATACCGTGCGTTATGCGGTTAACCATGAATTTGGAAACATTGATCAGTACAGTATATATACCCCGCCGTGCGGCCAGAACAATACTGTACAGCGCATAAGGCTCAAAAGTACAATATTGCATAGGATTTCAGGGTATGATCCATGCACTGAAAATTATGCAGAGAAATATTATAACCGCCCTGATGTGCAAAAAGCAATGCATGCAAATGTTACAAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTATTAAAATACTGGAAGGATTCTGCAGTTTCTGTCTTGCCCATATACAAAGAGTTAATTGCAGCTGGTCTGAGAATCTGGGTTTTCAGcGGAGACACAGATTCGGTGGTTCCAGTAACTGCAACTAGGTTTTCCCTCAACAGTCTCAACCTCACCATTAAAACTCGTTATTACCCATGGTACTCAGGTGGACAGGTAGGTGGATGGAGTGAGGTCTATGAAGGACTAACCTTTGCAACAGTACGAGGAGCAGGGCATGAAGTACCACTATTTCAGCCAGGGAGAGCTTTCACTCTCTTCAGATCGTTCTTGGCAGGGAAGAAGCTACCAAAATCTTGA 669 0.4185 MISDQSYSTILKYCNFTADKTSKICDDTVRYAVNHEFGNIDQYSIYTPPCGQNNTVQRIRLKSTILHRISGYDPCTENYAEKYYNRPDVQKAMHANVTNIPYKWTACSDVLLKYWKDSAVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNSLNLTIKTRYYPWYSGGQVGGWSEVYEGLTFATVRGAGHEVPLFQPGRAFTLFRSFLAGKKLPKS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1227 222 ProSitePatterns Serine carboxypeptidases, histidine active site. 186 203 IPR033124 GO:0004185
Sto3g1227 222 Gene3D - 122 216 - -
Sto3g1227 222 PANTHER SERINE CARBOXYPEPTIDASE 24 1 221 - -
Sto3g1227 222 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 221 IPR001563 GO:0004185|GO:0006508
Sto3g1227 222 SUPERFAMILY alpha/beta-Hydrolases 2 220 IPR029058 -
Sto3g1227 222 Pfam Serine carboxypeptidase 1 215 IPR001563 GO:0004185|GO:0006508
Sto3g1227 222 Gene3D - 75 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1227 Sto-Chr3 8851722 8854237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1227 80 219 Calmodulin-binding Proteins AT2G22960 29.078 3.49e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1227 K16297 - gmx:100783242 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1227 3 8851722 8854237 Sto3g1227 3 8851722 8854237 ECH