Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1221 ATGGCAACTCGCTGTGAAATCTTCTGCGAAATACTGATCGCCATCTTGCTCCCTCCATTGGGGGTTTGCTTCAGGCATGGCTGCTGCAGTGTTGAATTCATCATCTGCTTGCTCCTGACTCTACTAGGCTATATTCCTGGAATTATTTATGCTCTTTATGCTATTGTTTTTGTTGATCGCGATCAGTACTTTGATGAGTGTAGGCGTCCTCTGTATGCATAG 222 0.4459 MATRCEIFCEILIAILLPPLGVCFRHGCCSVEFIICLLLTLLGYIPGIIYALYAIVFVDRDQYFDECRRPLYA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1221 73 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 72 IPR000612 GO:0016021
Sto3g1221 73 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016021
Sto3g1221 73 PANTHER BNAA03G50460D PROTEIN 1 72 - -
Sto3g1221 73 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1221 Sto-Chr3 8817968 8818411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1221 1 72 RCI2 Gene Family AT4G28088 79.167 3.30e-38 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1221 - - jre:108996740 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1221 3 8817968 8818411 Sto3g1221 3 8817968 8818411 ECH