Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1215 ATGGAAGCTAGCACAGGGCTTTTTGCAGGATCCCATAACAGCAATGAGTTTGTGGTCATAGAAGGACATGAAGAGCCTAAGCCTGTGAGGAACATAGATGGTCAGGTGTGTGAGATTTGTGGTGATTGTGTGGGATTCACAGTGGATGGAGATTTGTTTGTGGCTTGTGAAGAGTGTGGCTTCCCTGTGTGTAGGCCATGCTATGAGTATGAAAGGAGGGAAGGGACTCAAGTTTGCCCTCAGTGCCAAACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTGGAgggagatgaagatgaagatgatgtggatgatattgaacatgagttcaaaatggaagaagaaaaggacaaGCTCAAGATTGGTGGCCATGGGGGAGATGATGAGAATGCTAAGTCACTAGCCAAGgttaaTGGGGAGATACTTATACCTGGAAATGCAAAGTTGGatgaaaagaaagagataacAGATGAGAGGAATTTCCAACAACAAGGAAATCTGTGGCCTGAAACTGAAGCCTCAGTAGATCCTGAGAAGGCCATGAGAGATGAAGCCAGACAGCCATTGTCAAGAAAAGTAGCAATACCATCAGGGAAGCTGAGTCCTTACAGAATGGTGGTAGTGGGTCGGCTAGTGATTCTAGTAATGTTTCTTCAGTACAGAATGTTTCACCCAGTGCCTGATGCAGTTGGACTATGGCTTATATCAGTAATATGTGAAGTATGGCTTACATTGTCATGGATTATTGATCAGCTTCCTAAATGGTTTCCCATTGATAGGGAGACTTACCTTGACAGGCTTTCAATCAGGTTTGAACCAGAGAACAAGCCGAATTTGTTTTCTCCAGTAGACGTCTTTGTCACTACTGTGGATCCATTTAAGGAACCTCCTCTAGTTACAGCCAATACAGTTCTTTCAATCTTGGCCATGGATTACCCTGCTAATAAAATCTCATGCTACGTTTCTGATGATGGAGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACTGCAGAATTTGCACGTAAGTGGGTACCCTTCTGCAAAAAATATTCCACAGAGCCTCGAGCCCCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTGAAAGACAAGGTCCAGTCTACATATGTAAGAGATCGCCGTACCATGAAGAGAGAATATGAAGAATTCAAGGTGAGGATTAATGCACTTGTGGCTAAAGCCATGAGAGTTCCTGAAGAAGGGTGGACTATGAAAGATGGAACACCATGGCCAGGAAACAATACCAATGATCATCCAGGAATGATACAGATTCTTCTTGCTCACAATGGAGGCCTTGAAGGAAATGAGCTTCCCTGTCTTGTTTACCTGTCTCGTGAGAAAAGGCCTGGGTTTCAACACCACAGCAAAGCCGGTGCCTTGAATGCAATGCTTCGAGTATCTGCAGTGCTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGCAATCATTATGTGAATAATAGCAAGGCTGTCAGAGAGGCCATGTGTTTCTTAACAGATCTACAAGTTGGGAAGAGCATTTGCTTTGTCCAGTTCCCGCAAAGATTTGACAGTCTCGATAAGCACGATCGCTATGCCAACAGAAACACTGTTTTATTTGATATTAACATGAGGTGTTTAGATGGAATTCAGGGACCTATTTATGTTGGTACAGGATGTATCTTCAGAAGGAAAGCTTTATATGGCGGTGATCCTCCAAAGGATTCAAAGCGCCCAAAAATGACAGGCTGTTGCTGCTGTCCATGTTTTGGATCCCGAAAGAAGCTACAAGTGCACTCTAAGCATGATGAAAATGGAGATGATGCAGGCATAACAGGACCAGAAGAAGGCAAGCAGCTTCTAGCATCAGAGTTGAATTTCGAAAATAAATTTGGAAAGTCTGCATTTTTTGTTAACTCTTCCATAACGGAAGAGGGTGGTATTCCTTCTTCCTCTAATCAGGCAGCCCTGCTTAAAGAAGCCATTAATGTCATGAGTAGTAGTTATGAAGACAGAACCCTATGGGGATATGAGGTAGGTTGGAACTATGGATCTGTATCAGCAGATATTTTGACGAGTTTTAAGATGCATTGTCGTGGTTGGAGATCTGTATATTGCATGCCAAATAGACCTGCATTCAGGGGTACTGCTTCTATCAACCTTTCAGATCGACTTAACCAGGTGCTTAGATGGGCAGTGGGATCGCTCGAGATCCTTTTCAGCCGCCACTGCCCAATATGGTACAGCTCAAATGAAGGAAAACTCAAGGGGCTTCAGAGGGTTGCCTATATCAGCAGCACTGTCTACCCTTTCAGCTCAATACCCCTCCTAATATATTGTCTCCTTCCTGCCGTCTGCTTGCTCACAGACAAATTCATCACACCATCGATAAGCACTTTTGCAAGTCTCATCTTCGTCGCACTGTTCATCTCAATCTTCGCATCGAATATTCTTGAGTTGAGATGGAGTGGAGTAACCCTTGAGGAATGGTGGAGAAATGAACAATTCTGGGTTATTGGCAGTGTGTCAGCACACCTTTTTGCAATTGTGCGAGGCTTTCTGAAAGCTGTGGCTAAAGTTGATATAAACTTCAGTGTCTTATCAAAGGTACCAGATGATGGGGAGTTCCGTGATCTGTACACCTTTAGATGGACTGCTCTCCTAATACCTCCAACCACTATCACAATCATCAATCTTGTTGGTATTGTAGCTGGGTTTACAGATGCTATAAACAGTGGTGGACAATCTTGGGGAGCACTACTTGGGAAGCTCTTTTTCTCCTTCTGGGTTCTCGTCCATCTCTACCCATTCCTTAAAGGTCTGATGGGTAGGCAGAACCGTACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCCTCTATCTTCTCCTTGCTTTGGGTAAGAATTGATCCTTTTGTGTTAAAAACAAAAGGACCTGACGTCAAGCAATGTGGAATCAGCTGCTGA 2976 0.4257 MEASTGLFAGSHNSNEFVVIEGHEEPKPVRNIDGQVCEICGDCVGFTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDVDDIEHEFKMEEEKDKLKIGGHGGDDENAKSLAKVNGEILIPGNAKLDEKKEITDERNFQQQGNLWPETEASVDPEKAMRDEARQPLSRKVAIPSGKLSPYRMVVVGRLVILVMFLQYRMFHPVPDAVGLWLISVICEVWLTLSWIIDQLPKWFPIDRETYLDRLSIRFEPENKPNLFSPVDVFVTTVDPFKEPPLVTANTVLSILAMDYPANKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKYSTEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINALVAKAMRVPEEGWTMKDGTPWPGNNTNDHPGMIQILLAHNGGLEGNELPCLVYLSREKRPGFQHHSKAGALNAMLRVSAVLSNAPFVLNLDCNHYVNNSKAVREAMCFLTDLQVGKSICFVQFPQRFDSLDKHDRYANRNTVLFDINMRCLDGIQGPIYVGTGCIFRRKALYGGDPPKDSKRPKMTGCCCCPCFGSRKKLQVHSKHDENGDDAGITGPEEGKQLLASELNFENKFGKSAFFVNSSITEEGGIPSSSNQAALLKEAINVMSSSYEDRTLWGYEVGWNYGSVSADILTSFKMHCRGWRSVYCMPNRPAFRGTASINLSDRLNQVLRWAVGSLEILFSRHCPIWYSSNEGKLKGLQRVAYISSTVYPFSSIPLLIYCLLPAVCLLTDKFITPSISTFASLIFVALFISIFASNILELRWSGVTLEEWWRNEQFWVIGSVSAHLFAIVRGFLKAVAKVDINFSVLSKVPDDGEFRDLYTFRWTALLIPPTTITIINLVGIVAGFTDAINSGGQSWGALLGKLFFSFWVLVHLYPFLKGLMGRQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1215 991 SUPERFAMILY Nucleotide-diphospho-sugar transferases 295 812 IPR029044 -
Sto3g1215 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Sto3g1215 991 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Sto3g1215 991 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 424 573 IPR029044 -
Sto3g1215 991 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 273 372 IPR029044 -
Sto3g1215 991 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Sto3g1215 991 PANTHER CELLULOSE SYNTHASE 1 991 - -
Sto3g1215 991 Coils Coil 382 402 - -
Sto3g1215 991 Pfam Cellulose synthase 284 985 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sto3g1215 991 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 991 - -
Sto3g1215 991 SUPERFAMILY RING/U-box 21 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1215 Sto-Chr3 8776235 8782831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1215 1 991 Cell Wall Biosynthesis AT5G17420 68.027 0.0 1453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1215 K10999 - gmx:100777270 1563.9