Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1206 ATGTCAACCATCATAGGTGCCAAACGTACATTCACATACTTCAAAACGGCAGTTAGATTTTCCATGTTTGCATTAATTCTGTGTCTGGCCATTAATGTTGATGGGGAAGAAAGTGCCCACCAGGTGAATGATGAAAGTTCTCTAAGATCATTCATGAGAGGCATTGTTTCTGACCCACATAACGCTCTAGAGAGCTGGAAATCTCCTGGCGTTCATGTGTGTAACTGGTCAGGCATAAGATGTAACAATGCAAGTGATAGAGTCATAGAGATTGACCTTAGTGGAAAATCACTAGCAGGCACTATTTCCCCTGCTATTTCCAACCTCTCATCATTGAGAATTCTTGATCTTTCTCAGAATTCTTTTGTGGGTCACATTCCAAAAGAGCTAGGCTTCTTAACTCAGCTAGGACAACTCAGTCTATCTTGGAATTTTCTTCAAGGGAAAATTCCCCCTGAGTTGGGCTCACTTCATAACTTATACTACCTTGACATGGAAAGCAATCAGCTTGAGGGTGAGATTCCATCATCACTTTTCTGCAATGGCTCTCACTCCTTAAGGTATATAGACCTCTCTAACAATTCCTTAGAGGGAGAAATCCCATTGAGCAATCAGTGTATGCTTCAAGAGCTTAGGTTCCTCTTGCTTTGGTCTAACCATCTTGTAGGTCAAGTTCCTTTAGCTCTTGCTAACTCCACAAAACTCAAATGGCTTGATTTAGAGTCAAATACGCTTAGTGGAGAATTACCATATGAGATTGCACTTAAATGGCCACAACTACAATTCCTCTACTTGTCATATAATGACTTTGTCAGCCATGATGGTAACACCAATCTTGATCCTTTCTTTGCTTCCTTGAAAAATCTATCGAACCTTCAAGAGCTCGAATTAGCAGGAAATCATTTTGGTGGGAAGCTAACTCATACTATTGGTGATCTTCCTGTGAGCCTTGTACAGCTTCATTTAGATGACAATCTCATTTATGGCTCTATTCCTCCTCACATTGCCAACCTTGTGAACTTGACTCTCTTGAATTTTTCAAGTAATCTTCTAAATGGATCAATCCCTCCTAGCCTCTGCAAGATGGGAAATCTGGAGAGAATCTATCTGTCCAATAATTCACTATCTGGTGAGATTCCTTCAGCACTTGGTGACATTCAGCATCTAGGCCTTCTAGATTTGTCAAGAAACAAGCTTTCTGGTTCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTACTGTATGAAAACCAGCTTTCCGGAACGATTCCGCCGAGTCTTGGAAAATGCGACAACTTGGAGATTTTAGACCTTTCTCACAACAGAATTTCTGGGGTGATTCCTACAGAAGTTGCAGCCTTGACTAGCTTGAAACTGTATTTGAACTTATCAAGCAATGACTTGAATGGCCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATCTGTCCAATAATAATCTTTCTGGAAGAATCCCACCACAGCTTGAAAGCTGTATAGCACTAGAGTATCTCAACCTTTCTGGGAACTCTTTAGAGGGTCCTCTCCCTTTTTCTTTAGGCCAATTGCCTTATATTAAGGCACTTGATGTCTCTTCAAATGGATTAACTGGGGAAATACCAGAGTCCCTTCAGTTATCTTCAACTCTCAAGAAATTCAATTTCTCCTTCAACAAATTCTCAGGGAATGTATCAAACAAGGGAGCATTTTCATCTCTGGACATAAACTCCTTCCTAGGAAATGATGCTCTCTGTGGCTCCATAAAGGGCATGTCAAGCTGCCACAAGAAGCACACCTACCATTTGATTCTTCTTCTAATTCCAGTGTTACTATTTGCCACTCCTCTTGTGTGCATGTTCGGCTACCGATTGGGGCACAAGGCGAAAATTCAAAGGCGATTGGCAATAGTTAGCAGAAATGactttgatgatgatgaagaagaaacaaaagagCTCATGTACCCAAGAATCTCATACAGACAACTCATTGAAGCCACTGGAGGCTTCAGTGCTTCAAGCCTAATTGGTTCAGGAAGATTTGGGCATGTGTACAAGGGAGTCCTCAGAGACAACACCAGAATAGCAGTGAAGGTTCTAGATGCCACCACAGCAAGTGAGATTTCAGGAAGCTTTAGAAGGGAGTTTCAGATTCTGAAAAGGACTAGACACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAGAGTTCAAGGCTCTTGTGCTTCCACTAATGCCAAATGGTAGCCTTGAGAGGCACCTATATCCGAGCCATGGGTTGAGCCAGAGGTTGGACTTGGTTCAGATAGTGAGGATATGCAGTGATGTGGCTGAAGGAATGGCTTACTTGCACCATTACTCTCCAGTAAGAGTGGTTCATTGTGATCTTAAGCCAAGCAATATACTTCTTGATGATGATATGACAGCTTTGGTTACGGATTTTGGAATTTCAAGGCTTGTAAAAGGTGATGAGAGTATGTCCTCAAGTAATAGTTCAGCATCTTTAAGTTCAACACACGGCTTGTTATGTGGTTCTGTTGGCTATATAGCCCCTGAATATGGAATGGGAAAACAAGCATCAAGCCATGGTGATGTGTACAGTTTTGGAGTATTAGTTCTAGAAATAGTGACAGGAAGGCCTCCCACAGATGTGCTTGTGCATGAAGGCTCAAGCTTGCATGAGTGGGTGAAGAGACAGTATCCATACAAGCTTGACAACGTTGTACAACAAGCATTACAGAGgttgtctccttcttcttcttcttcttcttcatcttcttcttcaagatCAAGAAAATATGATGACAAGTGTGACCATAAAATGTGGGAAGATGTAATATTGGAGCTCATAGAGATGGGGCTTCTCTGCACACAGCATAATCCCATGACAAGGCCAAGCATGTTGGATGTGGCTCAAGAGATGGGCAGGTTGAAGGACTATTTGTGTAATTCATCTTTTGGAGATGAAGCTCTTAACTACTCCATTAAGCTTGGTGATTCTTTTTCTAGTGAAGATAATTTAGTTCagaagtaa 3060 0.4042 MSTIIGAKRTFTYFKTAVRFSMFALILCLAINVDGEESAHQVNDESSLRSFMRGIVSDPHNALESWKSPGVHVCNWSGIRCNNASDRVIEIDLSGKSLAGTISPAISNLSSLRILDLSQNSFVGHIPKELGFLTQLGQLSLSWNFLQGKIPPELGSLHNLYYLDMESNQLEGEIPSSLFCNGSHSLRYIDLSNNSLEGEIPLSNQCMLQELRFLLLWSNHLVGQVPLALANSTKLKWLDLESNTLSGELPYEIALKWPQLQFLYLSYNDFVSHDGNTNLDPFFASLKNLSNLQELELAGNHFGGKLTHTIGDLPVSLVQLHLDDNLIYGSIPPHIANLVNLTLLNFSSNLLNGSIPPSLCKMGNLERIYLSNNSLSGEIPSALGDIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENQLSGTIPPSLGKCDNLEILDLSHNRISGVIPTEVAALTSLKLYLNLSSNDLNGPLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFSLGQLPYIKALDVSSNGLTGEIPESLQLSSTLKKFNFSFNKFSGNVSNKGAFSSLDINSFLGNDALCGSIKGMSSCHKKHTYHLILLLIPVLLFATPLVCMFGYRLGHKAKIQRRLAIVSRNDFDDDEEETKELMYPRISYRQLIEATGGFSASSLIGSGRFGHVYKGVLRDNTRIAVKVLDATTASEISGSFRREFQILKRTRHRNLIRIITICSKPEFKALVLPLMPNGSLERHLYPSHGLSQRLDLVQIVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDMTALVTDFGISRLVKGDESMSSSNSSASLSSTHGLLCGSVGYIAPEYGMGKQASSHGDVYSFGVLVLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNVVQQALQRLSPSSSSSSSSSSSRSRKYDDKCDHKMWEDVILELIEMGLLCTQHNPMTRPSMLDVAQEMGRLKDYLCNSSFGDEALNYSIKLGDSFSSEDNLVQK 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1206 1019 ProSiteProfiles Protein kinase domain profile. 677 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1206 1019 Pfam Leucine Rich repeat 435 449 IPR001611 GO:0005515
Sto3g1206 1019 Pfam Leucine rich repeat 364 423 IPR001611 GO:0005515
Sto3g1206 1019 SMART serkin_6 677 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1206 1019 ProSiteProfiles Leucine-rich repeat profile. 436 457 IPR001611 GO:0005515
Sto3g1206 1019 CDD STKc_IRAK 683 986 - -
Sto3g1206 1019 SMART LRR_typ_2 410 434 IPR003591 -
Sto3g1206 1019 SMART LRR_typ_2 289 313 IPR003591 -
Sto3g1206 1019 SMART LRR_typ_2 109 133 IPR003591 -
Sto3g1206 1019 SMART LRR_typ_2 338 362 IPR003591 -
Sto3g1206 1019 SMART LRR_typ_2 157 181 IPR003591 -
Sto3g1206 1019 SMART LRR_typ_2 386 409 IPR003591 -
Sto3g1206 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Sto3g1206 1019 SUPERFAMILY L domain-like 50 273 - -
Sto3g1206 1019 SUPERFAMILY L domain-like 340 594 - -
Sto3g1206 1019 Gene3D Phosphorylase Kinase; domain 1 647 752 - -
Sto3g1206 1019 Gene3D Ribonuclease Inhibitor 42 207 IPR032675 -
Sto3g1206 1019 Gene3D Ribonuclease Inhibitor 208 605 IPR032675 -
Sto3g1206 1019 SUPERFAMILY Protein kinase-like (PK-like) 656 981 IPR011009 -
Sto3g1206 1019 PANTHER OS04G0122200 PROTEIN 34 987 - -
Sto3g1206 1019 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Sto3g1206 1019 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Sto3g1206 1019 Pfam Protein kinase domain 679 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1206 1019 Gene3D Transferase(Phosphotransferase) domain 1 754 993 - -
Sto3g1206 1019 MobiDBLite consensus disorder prediction 922 942 - -
Sto3g1206 1019 MobiDBLite consensus disorder prediction 922 937 - -
Sto3g1206 1019 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 34 987 - -
Sto3g1206 1019 Pfam Leucine Rich Repeat 185 203 IPR001611 GO:0005515
Sto3g1206 1019 Pfam Leucine Rich Repeat 510 529 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1206 Sto-Chr3 8716577 8720516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1206 44 994 Receptor kinase-like Gene Family AT3G47570 33.589 1.60e-153 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto3g1206 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1206 - - lang:109346572 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1206 3 8716577 8720516 Sto3g1206 3 8716577 8720516 ECH