Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1194 ATGGAGAAGAGTTTAATGGGAAGAGACATGGCAGCACTTGGCCAAATTGGTGGTGCACGTGAAATGAAAAGCAAGTGGGAGTCTTCCGTGGTACAACAACTTTCAGTGGTGAAGACATTGAATGGAACCAATTATGATGATTGGTTTGAATCCCTACAAATGTATCTCATTATTTCAAGGGACGATCTAGCAATGAGGGAGCCAAGACCAACAGCCTTGATTGAACAATCCAGTGAAGCTGACAAAGCATATCATAAGCAGTGGCATGACTCCAACAGGATATGTCTGACTATTCTGAAATACACAATAGAGAAAAACATAAGGCAGAGTATTCCTGAGAAGGAGACTGCTACTGAATTTTTGAAGGCTATCAGTGACAAATACAAGAAATTTGAAAAGTCACAGAAAGCATATTATCTCTCTTTACTAGACAATACTAGGTATGACGGAGTGTCAGGGGTACGTGAACACATGATGAAACTGCTGAACTATTTTAATAAGCTGAAAGGATTGAAGGTTGATCTTGGGGAGAGTTATCTGGCTCATCTAGTAAGAGTGGTAAtgagaaagggaaaggaaaaaaaatttgataagaagaagaaatctTTTGGGCCTAAGAAGAATGattttaaggttaagggtaaaGGTAAGATCAAGGAAGGCTTTAAAGGAGAATGTTTCTATTGTAAGAAATCTGGGCATAGAATTACTGATTGTTTCaaacttaagaaaaagaatGAGAAGGAGGCTGGTCCACCAGAATTCTTATGGGGTGACGCACTTAAAACAGCAGCGTATATTTTGAATCAAGTTCCGAGCAAATCAGTTGAGAAAACTCCCTATGAAATATTCACAGGAAAGAAACCTAGTATGAAACACTTTCGTGTATGGGGTTGTAAAGCCGAGGTTAGACCTTTTAATCCCCAACAAAAGAAACTTGATTTGAAAACTATTACTGGATATTTCATTGGATATTGTATAGGATCTAGAGGGAGTAGATTTTATTGCCCTAGTCATTCTACAAGGGTAATAGAATCTGATAGAGCATTCTATTTTGAGAATGACTCAGATAGTGGGAGTGAAGCTCCTAGAACTATTAAGCTGCATAATGAAGACACATTATTAATCATGCCTTCTATACCATCTTCTTCCACTACTCATATACCTACAAGAGCTCATGATAACATTGAAGTTCCAGTAGATGTAAATTCTACTGATTATGTTCAAGATGAACAAGTTATTGAACCTCCAATCAATGAAGTACAGGAACAAGTTCCTGAACCAGTTGTAAATTTGAGACGGGGAGCGCCAAGCCAATCTCTCTCTGGAACTCTATCTGGAGCAATAGGAAATCTGACAAATCTTCGACAAGTGTTATTGCAGAATAACAATATCTCTGGCAAAATCCCACAGGAGCTTGGTACCCTTCCCAAGCTTCAGACTGTAGATCTTTCCAATAATCGGTTCTCTGGTTCCATTCCAGGGACTCTGAGTAGATTGAATAGTCTCCAGTACCTGGACTTGTCTTTTAACAATCTCAGTGGACCACTACCCAAGTTTCCGGCTAGAACATTCAATGTTGTGGGAAACCCCATAATTTGTGGAAGCAGCTCTTCTGAAGGTTGCTCTGGAACAGCAATCCTTACACCAGTTTCCTTCTCTCTAACATTGTCACAAGGAAAACACAAATCCAAGAAGCTAGCAATTGCACTTGGGGTCAGTCTTAGCTTTGCCAGTATCATACTACTGTCTTTTGGGCTCATCTGGTATAGAAAGAAAAGGCAGAACCGAGCCATCCTGTACATCAGCGATTTTCAAGACGATGGACTTGTTAGCTTGGGAaatctaaaaaattttactttcaGAGAGCTGCAGCATGCAACAGATAACTTCAGCTCCAGGAACATACTTGGTGCAGGAGGTTTTGGTAATGTCTATAGGGGAAAGCTTGGAGACGGGACAATGGTGGCAGTGAAAAGGCTGAAGGATGTAACTGGAAGTGCTGGGGAATCCCAGTTTCGAACAGAACTGGAGATGATCAGCTTGGCTGTTCATCGCAATTTACTTCGCTTGATTGGATTTTGTTCTACTCCTAATGAAAGGCTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTAGCTTCCAGGCTCAGAGGAAAACCTTCACTAGACTGGAACACGAGAAAGAGGATTGCTATTGGAGCTGCCAGAGGACTTTTGTATCTACACGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCAGCTAATGTGCTTCTGGATGATTATTGTGAGGCTGTTGTTGGTGATTTTGGCCTCGCAAAGCTCCTTGATCATGCCGACTCTCATGTCACCACTGCTGTTCGTGGCACTGTCGGGCACATTGCACCGGAATACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACGGCCCTCGAGTTTGGGAAAACGGTGAATCAAAAAGGCTCAATGCTAGAGTGGgttaAGAAAATTCAGCATGAAAAGAAGGTTGAAGTGTTGGTGGACAAAGAGCTAGGGAGCCACTATGACTGGATAGAGGTTGGGGAAATGCTGCAAGTAGCTTTACTCTGTACTCAATATTTGCCGGCCCACCGCCCTAAAATGTCCGAAGTGGTTCGAATGCTCGAAGGCGACGGCCTTGCCGAGAAATGGGCGGTGTCACATAATCATGGTAGCCTCAGCATGAACTCCCTCCACAGCAATAGTTCATCATCTGGCCGCCCTACCACTTCTTCAAATTCAAAACATGATGACATTATTGTTCATGATCGCTGCTCCAACATGTTTGGCATGGcaatggatgatgatgatgatgggcaTTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCAAGATAA 2937 0.4062 MEKSLMGRDMAALGQIGGAREMKSKWESSVVQQLSVVKTLNGTNYDDWFESLQMYLIISRDDLAMREPRPTALIEQSSEADKAYHKQWHDSNRICLTILKYTIEKNIRQSIPEKETATEFLKAISDKYKKFEKSQKAYYLSLLDNTRYDGVSGVREHMMKLLNYFNKLKGLKVDLGESYLAHLVRVVMRKGKEKKFDKKKKSFGPKKNDFKVKGKGKIKEGFKGECFYCKKSGHRITDCFKLKKKNEKEAGPPEFLWGDALKTAAYILNQVPSKSVEKTPYEIFTGKKPSMKHFRVWGCKAEVRPFNPQQKKLDLKTITGYFIGYCIGSRGSRFYCPSHSTRVIESDRAFYFENDSDSGSEAPRTIKLHNEDTLLIMPSIPSSSTTHIPTRAHDNIEVPVDVNSTDYVQDEQVIEPPINEVQEQVPEPVVNLRRGAPSQSLSGTLSGAIGNLTNLRQVLLQNNNISGKIPQELGTLPKLQTVDLSNNRFSGSIPGTLSRLNSLQYLDLSFNNLSGPLPKFPARTFNVVGNPIICGSSSSEGCSGTAILTPVSFSLTLSQGKHKSKKLAIALGVSLSFASIILLSFGLIWYRKKRQNRAILYISDFQDDGLVSLGNLKNFTFRELQHATDNFSSRNILGAGGFGNVYRGKLGDGTMVAVKRLKDVTGSAGESQFRTELEMISLAVHRNLLRLIGFCSTPNERLLVYPYMSNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGSMLEWVKKIQHEKKVEVLVDKELGSHYDWIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAVSHNHGSLSMNSLHSNSSSSGRPTTSSNSKHDDIIVHDRCSNMFGMAMDDDDDGHSLDSYAMELSGPR 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1194 978 SMART serkin_6 631 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1194 978 Gene3D Transferase(Phosphotransferase) domain 1 708 918 - -
Sto3g1194 978 Gene3D Ribonuclease Inhibitor 418 547 IPR032675 -
Sto3g1194 978 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 433 978 - -
Sto3g1194 978 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Sto3g1194 978 MobiDBLite consensus disorder prediction 920 940 - -
Sto3g1194 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Sto3g1194 978 ProSiteProfiles Zinc finger CCHC-type profile. 226 239 IPR001878 GO:0003676|GO:0008270
Sto3g1194 978 Pfam gag-polypeptide of LTR copia-type 88 179 - -
Sto3g1194 978 SUPERFAMILY L domain-like 439 521 - -
Sto3g1194 978 Pfam Protein kinase domain 633 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1194 978 Pfam Leucine rich repeat 454 513 IPR001611 GO:0005515
Sto3g1194 978 ProSiteProfiles Protein kinase domain profile. 631 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1194 978 SUPERFAMILY Protein kinase-like (PK-like) 614 901 IPR011009 -
Sto3g1194 978 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 433 978 - -
Sto3g1194 978 MobiDBLite consensus disorder prediction 920 942 - -
Sto3g1194 978 Gene3D Phosphorylase Kinase; domain 1 602 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1194 Sto-Chr3 8580076 8598170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1194 435 978 Receptor kinase-like Gene Family AT5G16000 61.111 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto3g1194 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1194 - - gmx:100797186 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1194 3 8580076 8598170 Sto3g1194 3 8580076 8598170 ECH