Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1185 atgggtgggttagAAGCTCAATATCTTCCTGCAATAGGAATGATTTTCTTGCAATTTTATTATGCAGCTCAAGCCATGCTCACTAGAGCTGCTCTCTTGCAAGGAATGAGTGCAAGGGTGTTTGTAACCTACAGGCAAGCCATAGCCACTTTGGCTTTGGCTCCATTCCTTTTATCCTTCAAAAGGAGACATTCTTTTAAGACTTCACTGGGATTCTGGAACTTGTCTTTGATGTTTCTCACCTCTTTAACCGGAGTAACAGTAAATCAGAATGCATATTTCGAAGGTTTACACTTGTCATCTTCTACAGTAACCACTGCCATGACTAATCTTGTTCCCGCAGTAACCTTTTTTATTACAGCAATTGTAGGATTGGAGAAAATAGAGTTGAGAAGCGTGAGAAGTTTAGCAAAAATAATAGGAACAGTTTTGTGCGTTGGTGGAGCCATAACCATGGCATTACTCAAAGGACAGAAGCTGCTACACATGGATTTCCTTCTCTCTAGACATGGCGGCGACAATTGGCTTCTTGGTTGTGCATTGCTCTTGATATGCTCTTTTGCTTGGTCATTTTGGATGATCATGCtgGTACCAATTTCTTCAAGCTGCCCTGACCATGTATTGTCAACTTTTTGGATGTGTCTCATGGCAACAATACAAACAGCCATATTCACTCTGGTGTATGAGCATGATTTCCAAGTATGGATTCTAAATTCACCTATACAATACTCATGCTGCTTATATGCGGGAATTGGAAGTGCTGTGACCTATTTCATTCAATGTTGGTGTATCTCAAAAAGAGGTCCGTTGTATAGTGCAATGTTCACCCCTCTTTGCACAGTCATCACAGCCATCATATCTATCACTTTACTACATGAACAACTATATGTTGGAAGATTGATAGGGGCTTTAGGGGTGATCGTTGGATTATACGTAGTGCTATGGGGAAAGGCTAAAGAGGCAGAAGAGATCAAGGGAGAGGAACAACCAAAGTTGCAGAATAATGAGATAAATTGTGAAATAGATTTGGAAGAACCACTAATTTTATCAGAAAAGCCGGAAGATATAGCAGAGGGTAAAATGAATTAA 1089 0.3949 MGGLEAQYLPAIGMIFLQFYYAAQAMLTRAALLQGMSARVFVTYRQAIATLALAPFLLSFKRRHSFKTSLGFWNLSLMFLTSLTGVTVNQNAYFEGLHLSSSTVTTAMTNLVPAVTFFITAIVGLEKIELRSVRSLAKIIGTVLCVGGAITMALLKGQKLLHMDFLLSRHGGDNWLLGCALLLICSFAWSFWMIMLVPISSSCPDHVLSTFWMCLMATIQTAIFTLVYEHDFQVWILNSPIQYSCCLYAGIGSAVTYFIQCWCISKRGPLYSAMFTPLCTVITAIISITLLHEQLYVGRLIGALGVIVGLYVVLWGKAKEAEEIKGEEQPKLQNNEINCEIDLEEPLILSEKPEDIAEGKMN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1185 362 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Sto3g1185 362 Pfam EamA-like transporter family 177 314 IPR000620 GO:0016020|GO:0016021
Sto3g1185 362 PANTHER WAT1-RELATED PROTEIN 11 344 IPR030184 GO:0016021|GO:0022857
Sto3g1185 362 PANTHER WAT1-RELATED PROTEIN 11 344 - -
Sto3g1185 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 156 - -
Sto3g1185 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1185 Sto-Chr3 8518364 8520411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1185 1 355 Nodulin-like Gene Family AT4G30420 44.267 1.47e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1185 - - gmx:100816384 431.024