Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1173 ATGGCACTGAAAATGAATGCAATAATGCTTGTGATGGGGTTTGCCATCGCTACCCTTGTCTCAGTGGCATCTGCCATCTCTGGAACCGCCACTTATTACACAGTATACGTTCCATCTGCGTGCTACGGGTATGAAGAGCAGGGAACGATGATCGCAGCAGCAAGTGACGCAATCTGGGACAACGGTGGCGCGTGTGGAAGAATGTATAGGATAACGTGCACAAGCGGGACCAACGCCGGCGTGGCTGAGCCTTGCAAAGGCGGAAGCGTGACCGTGAAGATTGTGGATCGCTGCCCTTCTCCGGGATGCCAGTCTACCATTGACCTCTCTCAGCAAGCTTTCTCTGTAATCGCCAACCCTGATGCCGGAAAAATCAATATTGTTTACACCCAGTCAGGTGTGATGAAGCGGCAGGTACCTACAACAATGCTAATGCACACACATGCTAGCCTAGCTTATGATTTATGa 468 0.5085 MALKMNAIMLVMGFAIATLVSVASAISGTATYYTVYVPSACYGYEEQGTMIAAASDAIWDNGGACGRMYRITCTSGTNAGVAEPCKGGSVTVKIVDRCPSPGCQSTIDLSQQAFSVIANPDAGKINIVYTQSGVMKRQVPTTMLMHTHASLAYDL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1173 155 Pfam Lytic transglycolase 52 129 IPR009009 -
Sto3g1173 155 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 5 131 - -
Sto3g1173 155 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 129 IPR007112 -
Sto3g1173 155 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 131 IPR044206 GO:0009627|GO:0048046
Sto3g1173 155 SMART dpbb_1 51 129 IPR007112 -
Sto3g1173 155 Gene3D - 24 131 IPR036908 -
Sto3g1173 155 SUPERFAMILY Barwin-like endoglucanases 15 131 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1173 50 153 Expansin Gene Family AT2G45110 29.565 6.56e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1173 - - pop:7493352 196.823