Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1167 ATGCTCTCGAGATCTTGCTTAGACCTATTGAATTTGGTGTCCGTCGACGATTACCGGGCACTCAGTCGTATACCCAGAGTCATGACCGTACCGGGAGGCATCTCCGAGGTCGgagccgccgccgccgccgaccAAGACGACCGCGCCGATTCGGCGTCCGGATCGGACGACGTCGTTTCCTGCGTCCCCCAAGAAAGAAGGATCATAGTGGCGAACCAATTGCCGGTGCGGGCTTCTCGTGTCGCCGAGACCGGAAAATGGGATTTCGAATTGGACAGTGATAGTTTAGTCCTTCAGCTCAGAGACGGATTACCGTGTGACGTGGAGGTTCTGTACGTCGGGTCGTTAAAAGCCGAGATCGACGCGTCGGAACAAGACCAAGTGGCTCAACTCTTGCTGGATAAGTTCCGCTGCGTGCCCACCTTCTTGCCTCCCGAAATCCACAATAAGTTCTACCATGGCTTCTGTAAGCATTACCTCTGGCCTCTGTTTCACTACATGATGCCTATGTCGCCCAGCCACGGCGCGCGTTTCGATCGCGCGCAGTGGCAAGCCTATGTGTTGGCCAACAAGATTTTCGCCGATAAGGTCACGGAGGTGATAAACCCGGACGAGGATTTCGTTTGGGTCCATGATTATCATCTCATGGTTTTGCCTACGTTGTTGAGGAAACGGTTTCACCAGGTCAAGCTCGGGTTTTTTCTGCATAACACATTCCCTTCGTCGGAAATATATAGGACTATTCCCGTTCGCGATGATATCCTTCGTGCATTTTTGAATTGTGATTTGGTCGGATTCCACACGTTTGATTACGCGAGGCATTTCTTGTCCTGTTGTAGCAGGATGTTGGGTCTTGATTATGAGTCCAAGAGGGGTTACATTGGGTTGGATTATTACGGTCGAACCGTGACGATTAAGATCCTCCCCGTTGGGATTCACATGGGTCAGCTTGAATCGGTGTTGTCTGTGGATCATACGGCTCGGAAGATTGGGGAATTGAGGAAGCAATTCGAGGGGAAGATCGTGATCTTGGGGGTGGATGACATGGATTTGTTCAAAGGTATCAGCTTGAAGTTCTTAGCAATGGGACAATTGTTGGATTTGCACGAGGATTTAAGGGGTCGTGTGGTTTTAGTTCAGATTCTGAACCCTGCTCGGAGCAAAGGGAAAGACATTCAGGATGTTCAGAGCGAGACGGATGCTATTGCGAGAGACGTCAATGCAAGGTACGGCAAGCCAGGGTACCAGCCAATCATCGTCATCAACGGCCCAGTTTCGACCCAGGAAAAAGCTGCCTACTACGCCATTTCTGAATGCTGCGTTGTGAATGCCGTGAGAGATGGGATGAACTTGGTCCCCTATGAGTACACTGTGTGTAGACAGGGGAGCCCTGTTTTGGACAAAGCCCTCGGTAATCTCGATGATTCGGTGAGTCCTAAAAACAGCATGATCATTGTGTCGGAATTCATTGGGTGTTCGCCGTCTTTAAGCGGAGCCATCAGGGTGAATCCTTGGAACATCGATGATGTCTCGGAGGCGATGAACCTGGCCATCACAATGCCAGAGGCAGAGAAGCATTTGCGTCATGAGAAGCATTATAAGTACATTAGCTCCCACGATGTGGCTTATTGGGCTCGGAGTTTTGATCAGGACTTAGAGAGAGCTTGTAGGGAGCATTACCTCAAGAGGTGTTGGGGTGTTGGATTaggcttggggtttagagttgttGCTTTGGATCCTACATTCAGGAAGCTCTCAGTTGAGAACATTGTCTCTGCCTATAGAAACACTCACAGTCGTCTGATTCTGTTGGACTATGATGGTACTATGTTGCCACAGGCTTCCATCAACAAGACTCCCACTGATGAGGTCATTTCTGTGTTGAATTTTCTGTGTAGTGATCCCAAAAACACAGTGTTCATTGTGAGTGGAAGAGATAAGAGTTGCTTGAGTAAGTGGTTCTCCACATGTGACAAGTTGGGTCTCTCAGCTGAGCATGGTTACTTCACTAGGTGGAGTAGGGATTCTGCTTGGGAGACATGTGGATTGACGATGGATTTTGATTGGAAGAAGATTGCAGAACCTGTTATGGCGCTTTACACTGAAGCAACCGATGGTTCCTTCATTGAACAAAAGGAAAGTGCATTGGTTTGGCATCATCAGGAAGCTGACCCTCATTTTGGATCATGCCAAGCCAAAGAGCTTCTTGATCACCTCGAGAGTGTGCTTGTCAATGAACCAGTAGTTGTCAAAAGAGGACAACATATTGTGGAAGTAAAACCTCAGGGTGTGAGCAAAGGGATAGTAGTGGAGAATATAATCTCAAGCATGAGAAGTGAGGGAAAGTCTCCAGATTTTCTGCTGTGCTTAGGAGATGATAGGTCAGATGAAGATATGTTTGAGAGTATTGCTCGGACAGTTTGTAATACAAGCATGGCAGAGATAGCAAAAGTGTTTGCATGCACAGTTGGTCAGAAACCAAGCATGGCAAAATACTTTCTGGATGATACTTATGAAGTCATCAAGTTGCTCAGAGGACTTGCTAATGCTTCACCAGCAGCACCACCCACAAAGTCTAATAAACATTTTCAGGAGTCGCAAGGGTCTTTGTAG 2613 0.4703 MLSRSCLDLLNLVSVDDYRALSRIPRVMTVPGGISEVGAAAAADQDDRADSASGSDDVVSCVPQERRIIVANQLPVRASRVAETGKWDFELDSDSLVLQLRDGLPCDVEVLYVGSLKAEIDASEQDQVAQLLLDKFRCVPTFLPPEIHNKFYHGFCKHYLWPLFHYMMPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDFVWVHDYHLMVLPTLLRKRFHQVKLGFFLHNTFPSSEIYRTIPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLESVLSVDHTARKIGELRKQFEGKIVILGVDDMDLFKGISLKFLAMGQLLDLHEDLRGRVVLVQILNPARSKGKDIQDVQSETDAIARDVNARYGKPGYQPIIVINGPVSTQEKAAYYAISECCVVNAVRDGMNLVPYEYTVCRQGSPVLDKALGNLDDSVSPKNSMIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNLAITMPEAEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRCWGVGLGLGFRVVALDPTFRKLSVENIVSAYRNTHSRLILLDYDGTMLPQASINKTPTDEVISVLNFLCSDPKNTVFIVSGRDKSCLSKWFSTCDKLGLSAEHGYFTRWSRDSAWETCGLTMDFDWKKIAEPVMALYTEATDGSFIEQKESALVWHHQEADPHFGSCQAKELLDHLESVLVNEPVVVKRGQHIVEVKPQGVSKGIVVENIISSMRSEGKSPDFLLCLGDDRSDEDMFESIARTVCNTSMAEIAKVFACTVGQKPSMAKYFLDDTYEVIKLLRGLANASPAAPPTKSNKHFQESQGSL 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1167 870 TIGRFAM T6PP: trehalose-phosphatase 599 848 IPR003337 GO:0003824|GO:0005992
Sto3g1167 870 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 852 - -
Sto3g1167 870 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 66 557 - -
Sto3g1167 870 MobiDBLite consensus disorder prediction 853 870 - -
Sto3g1167 870 Gene3D Glycogen Phosphorylase B; 320 537 - -
Sto3g1167 870 Gene3D Glycogen Phosphorylase B; 60 319 - -
Sto3g1167 870 MobiDBLite consensus disorder prediction 851 870 - -
Sto3g1167 870 CDD HAD_TPP 601 842 - -
Sto3g1167 870 Pfam Trehalose-phosphatase 603 837 IPR003337 GO:0003824|GO:0005992
Sto3g1167 870 Gene3D - 729 863 IPR023214 -
Sto3g1167 870 Gene3D - 599 715 IPR023214 -
Sto3g1167 870 Pfam Glycosyltransferase family 20 66 553 IPR001830 GO:0003824|GO:0005992
Sto3g1167 870 SUPERFAMILY HAD-like 600 848 IPR036412 -
Sto3g1167 870 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 601 803 IPR006379 -
Sto3g1167 870 CDD GT20_TPS 66 553 IPR001830 GO:0003824|GO:0005992
Sto3g1167 870 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 852 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1167 Sto-Chr3 8407561 8410428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1167 1 868 Trehalose Biosynthesis Gene Families AT2G18700 65.297 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1167 K16055 - gmx:100810498 1401.34