Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1161 ATGGAAAAAAGTGAGGGAAAGTATATGCGAAGGATGCGAAGCTTTGATAGCGAAATAGACCCAAATGATAGCAGAGAGCTTCTCTCATGGGCAATTAGAGTTCTAGCCCATCCAAATGACACTATCGTGGCCCTCCATGTTCTTGTTGCTAAggataataagaagaagaaaaagaagaagcgaGCCTCAGTGGCTAGAAGGCAATCACAACTCCGGCAGGCAAAAGCCTATGTCATATCTCTGCTTGGTGAATTTGCAAGGACATGTTGGTCTAAGGAGGTGAATTTGGAGGCTAAAGTGGCATTTAGTTCCGAAGTTGGTGGAGGTTTAGTGGAAGAAGCCAAGTCCATTTCtgctcattttcttcttcttcgtggATCTAGAAACCAATCTAACAAGATTAAGTCGTCTGATGGAATCACCAAGTATTGCTTTGAGAATGTTTATGAAGGCTGCACGGTGGTCTCAGTTGGGAAATGTTCAAAAACACAGCAAATTTCCAATTCTAATTGTACAGATTCTCAAGGGAATTATGAACAAAGTTCAAGGTGGTTTATGAAGGATAATCCAAGTGACAAAACAGAGTCCCCTGTTTTGAAGGAATTTATGTCAGAATCTAAGACACTAACACATTCACCAAGGACGGTATTGGATGAAATTGAAGGACAGTCTAACAGCACAGAAGATGATACATTTAGCACAATGGTCTCAAGCATCACAGACACCCCTTCAATGGCTTCTAAGATCAAAAGCCAATCCAAGTTAAGGAAACCACAATCTCCTTTCAGATTCATAGCCTCCTTCCTTGGCTCACCATTGAGAAGGAGAAACTCCAACAGGTCCAAAAATGATAAGAGACAACCTTTGTTGAAGTGCTTCAGCTACGAGGAGATCTCCAATGCCACAAATGGCTTCCACCAAGGTGAGCTAATGATATCTGTTTTAATGCTCCAAACATCAGATTATTTGGTTGGACGAGGTGGGTACTCTGAAGTATACAGAGGAGATCTTTCTGATGGACAAACAATTGCTGTGAAAAGGTTGTCCAAGGACAACAAGAATCCAAACAAGGAAAAGGAGTTTCTTATGGAACTAGGAGTGATTGGACACGTGTGTCATCCTAATACTGCAACTTTAGTTGGATGCTGCGTTGAAAATGGGCTCTATCTGGTTTTCAAGTACTCTCAAAATGGAAACTTGGCCACTGCATTGCATGGTAAAGCAGGGAAGGCACTAGAGTGGCCAATACGATACAGTATTGCCATTGGAGTTGCAAGGGGCCTGCATTATCTTCACAAATGTTGCAAACATCGAATCATTCATCGTGACATTAAAGCCTCCAATGTTCTTCTGGGCCCAGATTATGAACCACAGATAAGTGATTTTGGGTTAGCAAAGTGGCTTCCAAACAAGTGGACCCACCATGCTGTGATTCCTGTGGAGGGCACATTTGGGTACTTGGCACCAGAATGCTTTATGCATGGAATAGTGGATGAGAAAACAGATGTTTATGCATTCGGAATTCTTCTTCTGGAGATTGTCACTGGACGCAGACCTGTTGATTCTTCTAAACAAAACCTTCTCCTATGGGCAAAGCCTCTGATGGAATCAGGAAAGATTGGGGAGCTAGCTGATCCAAGAATGGAAGGTGCATATGAGGAAGAGCAATTGCAGAGAGTAGTGCTTACAGCTTCATACTGTGTGAGGCAATCTCCAATTTGGCGTCCCCCAATGAGCGAGGTGTTAGAACTGCTAACCAGTGGGCAAGACTGTGAAGCTGGAAAGAGTTGGAGGATCCCCAAGTTCGCTTCTGATGAGTTGGATGATTACTCCATGGTTTTTGGATATGAACTCCCTTCAGACATATCTCTTGAGGATTATTTGTGA 1887 0.4171 MEKSEGKYMRRMRSFDSEIDPNDSRELLSWAIRVLAHPNDTIVALHVLVAKDNKKKKKKKRASVARRQSQLRQAKAYVISLLGEFARTCWSKEVNLEAKVAFSSEVGGGLVEEAKSISAHFLLLRGSRNQSNKIKSSDGITKYCFENVYEGCTVVSVGKCSKTQQISNSNCTDSQGNYEQSSRWFMKDNPSDKTESPVLKEFMSESKTLTHSPRTVLDEIEGQSNSTEDDTFSTMVSSITDTPSMASKIKSQSKLRKPQSPFRFIASFLGSPLRRRNSNRSKNDKRQPLLKCFSYEEISNATNGFHQGELMISVLMLQTSDYLVGRGGYSEVYRGDLSDGQTIAVKRLSKDNKNPNKEKEFLMELGVIGHVCHPNTATLVGCCVENGLYLVFKYSQNGNLATALHGKAGKALEWPIRYSIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQISDFGLAKWLPNKWTHHAVIPVEGTFGYLAPECFMHGIVDEKTDVYAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGKIGELADPRMEGAYEEEQLQRVVLTASYCVRQSPIWRPPMSEVLELLTSGQDCEAGKSWRIPKFASDELDDYSMVFGYELPSDISLEDYL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1161 628 Pfam Protein tyrosine and serine/threonine kinase 324 583 IPR001245 GO:0004672|GO:0006468
Sto3g1161 628 SMART serkin_6 318 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1161 628 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Sto3g1161 628 Gene3D Transferase(Phosphotransferase) domain 1 396 598 - -
Sto3g1161 628 SUPERFAMILY Protein kinase-like (PK-like) 315 585 IPR011009 -
Sto3g1161 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Sto3g1161 628 PANTHER OS08G0249100 PROTEIN 19 618 - -
Sto3g1161 628 ProSiteProfiles Protein kinase domain profile. 318 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1161 628 Gene3D Phosphorylase Kinase; domain 1 276 394 - -
Sto3g1161 628 PANTHER OS08G0249100 PROTEIN 19 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1161 Sto-Chr3 8319551 8323001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1161 293 624 Trihelix Transcription Factor Family AT1G70460 37.429 4.09e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto3g1161 PK_Tyr_Ser-Thr 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1161 - - ccaj:109809416 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1161 3 8319551 8323001 Sto3g1161 3 8319551 8323001 ECH