Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1156 ATGCAGACTAATCTTCCTTACAACTCACAATCATCTTTTCCAATTGGTTTTAGATTTGCTCCATTTGATGATGAGATTATAGTTCATTATCTACTTCCAAAAGTTACTAATCAACCTTTGTCTTTTAACATAATCGAGGAGGTCAACGTATACAAATTTGATCCTCAAACTCTTTCAGAACAATACGTGGCTCAAGGTGAAGATAAATGGTATTTCTTCAGTACAAGAGAAAAGGTTAATAAAAAAGGAGGAAGTAATAACAAGCGAACAACAggagattttggattttggagagTTACAGATTCTCCACACTCTATAAATCATGAGGGTCTTCAAATTGGAAGTAAAACAACTCTAGTATACTACCGAGGTAAATCTTCCGATGCTAAAAAGACAAATTGGATCATGCATGAATTCGAGGCCAAGTCTTCACTAGACACAAAGcttGATGATATTGTCGTATGTAGAATATACGAGAGAAAAGCTTCGAATACTAGAAAGAGACCTCGTGTGGAAGAAGTGCATCTCACCGCCGTTCCACctctcagattcaagtcttcTCCGGCGGCTATTGTAGATGTTGTCGACAGTAACGGTGGTTCCGTCACCGGTGAGGCATTCCGTTGCAGCAGCTATGCATTTTACCGGTCGGTTATGGATTCCGTTCCCTTTCCCCTCCCATTTCGTCACTCCTCTGTCTTTCTCTCCGGCGTTTAG 717 0.378 MQTNLPYNSQSSFPIGFRFAPFDDEIIVHYLLPKVTNQPLSFNIIEEVNVYKFDPQTLSEQYVAQGEDKWYFFSTREKVNKKGGSNNKRTTGDFGFWRVTDSPHSINHEGLQIGSKTTLVYYRGKSSDAKKTNWIMHEFEAKSSLDTKLDDIVVCRIYERKASNTRKRPRVEEVHLTAVPPLRFKSSPAAIVDVVDSNGGSVTGEAFRCSSYAFYRSVMDSVPFPLPFRHSSVFLSGV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1156 238 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Sto3g1156 238 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Sto3g1156 238 Gene3D NAC domain 23 165 IPR036093 GO:0003677|GO:0006355
Sto3g1156 238 ProSiteProfiles NAC domain profile. 13 160 IPR003441 GO:0003677|GO:0006355
Sto3g1156 238 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 8 167 - -
Sto3g1156 238 PANTHER NAC TRANSCRIPTION FACTOR 56 8 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1156 Sto-Chr3 8265575 8267871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1156 9 167 NAC Transcription Factor Family AT3G15500 41.104 1.41e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto3g1156 NAM 2.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1156 - - pxb:103963821 149.443