Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1148 aTGGGTCGAGCTCCATGCTGTGACAAGGCCAACGTGAAGAAAGGACCTTGGTGGTCCATTATAGCAGCTCAGCTACCTGGAAGGACAGACAATGACATAAAGAACTACTGGAACACCAGATTGAAGAAGAAGCTTCTGGGAAGATCACGCATTAATAagcactcttcttcttcttcttcttcaagtaGTGCCATATCTCTCAGCAATTCGGCTCTTGAAAGGCTTCAACTTCACATGCACCTTCACAATAACCACAATCTTCATCATCAAAACCCCTTCTCTTTCTACAACAACAATCCTGCACTACTCTGCCCGCCCACCAAGCTCCATCCTAATTTCCACCAAAAACAGAATATTGATAATGATGATTTCTATAAACCCACCGCTTCTCATGAAGAAAACATCATCAATTCCTTGTGTGAGCCTACTAGTGTTGCaccaacatcatcatcatcagtacTGGTGGAAGCTGATCAGCTGCAACACACAATTCTCCACAGTAACAGAACAATGATGGGTTACAATAACAACATGACAGGACAGGATCAGGATCAAGATCAGGATGAGATGTGTGGTTTGGATTACTTGGGAATATCAGAAATATTGAATAATTATGATTCCAAGATGTGGTGGTCCAATGAGTTTGATGCCAAATCAGGATCCTCCAACAACTCTTGGGCTtcaactactactactactccgGTTGTTCAGGCAGAATTAGGCATGTTTCAAGATAATTATGAACTGCAGGGTTACAGTTTGTAG 765 0.383 MGRAPCCDKANVKKGPWWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRSRINKHSSSSSSSSSAISLSNSALERLQLHMHLHNNHNLHHQNPFSFYNNNPALLCPPTKLHPNFHQKQNIDNDDFYKPTASHEENIINSLCEPTSVAPTSSSSVLVEADQLQHTILHSNRTMMGYNNNMTGQDQDQDQDEMCGLDYLGISEILNNYDSKMWWSNEFDAKSGSSNNSWASTTTTTPVVQAELGMFQDNYELQGYSL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1148 254 CDD SANT 18 41 IPR001005 -
Sto3g1148 254 Gene3D - 9 68 - -
Sto3g1148 254 SUPERFAMILY Homeodomain-like 4 45 IPR009057 -
Sto3g1148 254 PANTHER TRANSCRIPTION FACTOR MYB36 18 246 - -
Sto3g1148 254 PANTHER TRANSCRIPTION FACTOR MYB36 1 17 - -
Sto3g1148 254 PANTHER OS09G0431300 PROTEIN 1 17 - -
Sto3g1148 254 PANTHER OS09G0431300 PROTEIN 18 246 - -
Sto3g1148 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 45 IPR017930 -
Sto3g1148 254 ProSiteProfiles Myb-like domain profile. 18 41 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1148 Sto-Chr3 8223006 8224175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1148 1 17 MYB Transcription Factor Family AT5G57620 100.000 1.78e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g1148 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1148 K09422 - fve:101300526 121.709