Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1137 ATGGAAACTGATGAGGAGTTGTCCGTTGTTCTTGAACTACCTAATGATGATATTTTCTATGATAAAAAGGAGaAATTACTACAAATTAAAGGTTTTAGTCCCAATGAACGGATATATCTTCGGCACTCTTCAGAACCTGGTTGGATGAGTGCTATTGTCAAAGTATTGGTTCAGATTGCAAGAATCATACATTTGAATGAGCTGGAACTTTATTTTGCTGATGATGTGCATTCATCAGGGGAATTTTACAGTCCCAGGAATGAGTTAGAGGCACTCAATTTCATTGTTTCACTCATTGACACATTACTTTCTAGTTGTAAACATTGGCATACAAATGTACTGCAAGAGTTGCAAACAACAATTCTTGGCTTAATTTCTGATTTTGGCGACAAGAATGGTATGAAAGCAATAGTCGAAAAAGACCACTTTTGTGACCAGGAAGAACTACTGTTAGAATGGGGTAAAAGCAATGGTGTAAGGACCCAATTACAGATAGCATATGTTAAAGGAGCAGGTAGGGGTGCCATAGCTGAAAAAGACCTTAAAGTTGGAGATATTGCTTTAGAAATTCCTGTGTCCATTATCATTAGTGAGGAGCTTGTCCTTGAAACTGATATGTACAATGTCCTGAAGGAGGTTGATGGCATATCATCTGAGACAATATTGCTATTATGGAGCATGAAAGAGAAACACAACagcaattcaaaattcaaaatttacttTGACACACTCCCAGAAAAATTTAATACTGgATTGAGCTTTGGAATTGATGCAATTACAGCTTTAGATGGAACCTTGCTCTTGGAAGAGATAATGCAAGCAAGACAGCACCTGCATGATCAATATGATGAATTGTTCCCTGCTTTGTGCACTGCTTTTCCTGATATATTTCCACCAAAGCTGTACACGTGGGAGCACTTTCTATGGGCTTGTGAACTCTGGTATTCAAATGGTATGAAGATAATGTTTTCTGATGGAACGTTAAAGACGTGCTTAATTCCTATTGCTGGATTTCTTAACCATTCACTGTGCCCACACATTATGCACTATGGAAAAGTAGATACTGCAGCAAATTCATTGAAATTTCGTCTGTCAAGACCATGCAGATCTGGAGAAGAATGTTGTCTAAGCTATGGGAATTTCTCTAGTTCTTATTTCCTTACCTTTTATGGGTTCTTACCGCAAGGAGACAACCCATATGATGTCATTCCGCTAGACATTGATTCTACTGAGGATAAAAGCATGTCCAGCTCGACCACTCACATGGTGCGGGGTACTTGGCTCTCCAACAACCACAATATGTACTACTATGGCCTCCCCTCCCCATTATTGGACCATCTTCGCAGATCTCGAAGTCCCATGCTGCGAACTAAGACTTATTTGCAAGGGGACTTGGAAAATGAGCTGGAAATCCTAGAAGATCTCAGATCTATCTTTGATAAAATGTTGGACGGTATGGATGAAACAAGTCTTGATAACAGAGAAATGTGGAGTTGGGATGAAAAATTGGCACATGAGTACAAATTTCAACAAAGACGAATTGTCTCATCTATTTCAACTTCATGTCTTACTGGTGTCGACATGGCTAAGAATGAACTGTGCAAGTGCCTGGCTGAGGACAGCCTAGGGTAA 1632 0.3897 METDEELSVVLELPNDDIFYDKKEKLLQIKGFSPNERIYLRHSSEPGWMSAIVKVLVQIARIIHLNELELYFADDVHSSGEFYSPRNELEALNFIVSLIDTLLSSCKHWHTNVLQELQTTILGLISDFGDKNGMKAIVEKDHFCDQEELLLEWGKSNGVRTQLQIAYVKGAGRGAIAEKDLKVGDIALEIPVSIIISEELVLETDMYNVLKEVDGISSETILLLWSMKEKHNSNSKFKIYFDTLPEKFNTGLSFGIDAITALDGTLLLEEIMQARQHLHDQYDELFPALCTAFPDIFPPKLYTWEHFLWACELWYSNGMKIMFSDGTLKTCLIPIAGFLNHSLCPHIMHYGKVDTAANSLKFRLSRPCRSGEECCLSYGNFSSSYFLTFYGFLPQGDNPYDVIPLDIDSTEDKSMSSSTTHMVRGTWLSNNHNMYYYGLPSPLLDHLRRSRSPMLRTKTYLQGDLENELEILEDLRSIFDKMLDGMDETSLDNREMWSWDEKLAHEYKFQQRRIVSSISTSCLTGVDMAKNELCKCLAEDSLG 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1137 543 Gene3D set domain protein methyltransferase, domain 1 145 393 - -
Sto3g1137 543 Gene3D - 2 119 IPR036464 -
Sto3g1137 543 Pfam Rubisco LSMT substrate-binding 15 106 IPR015353 -
Sto3g1137 543 PANTHER BNAA07G01600D PROTEIN 6 539 - -
Sto3g1137 543 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 539 - -
Sto3g1137 543 SUPERFAMILY SET domain 148 400 IPR046341 -
Sto3g1137 543 CDD SET_LSMT 163 393 - -
Sto3g1137 543 Pfam SET domain 172 379 IPR001214 GO:0005515
Sto3g1137 543 ProSiteProfiles SET domain profile. 161 379 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto3g1137 SET 8.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1137 K19199 - gmx:100778605 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1137 3 8088960 8095274 Sto3g1137 3 8088960 8095274 ECH