Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1126 ATGAAGACCATTCCGCCCAGCTTCCTGCAGCAAGCGCCGCCTCCAAAACAGACGACGGTGGTGCCTCCGTCCCCGAAGAAGGCCTCCGACACCTTCGGCCAACGCACCTCCATCTATCGCGGCGTCACACGGTTACTCTCTCTCCGCATAGATGGACGGGGAGATATGAAGCTCATCTATGGGATAACAGCTGCAGAAGAGAGGGGCAAAGTAGGAAAGGAAGGCAagATTCTGATATATATGCTGTTTCTTTTGTTTGCTCGTGTTGTACCTGATGAATCATCATCATTGCTTGCTGATCCGTGGGGTGCTTTTATGGTTTCATCAGTTTACTTGGGTGGATACGATAAGGAAGAGAAGGCAGCCAGAGCTTATGATCTCGCTGCTCTCAAATACTGGGGTCCAACCACTACCACCAATTTTCCTATTTCCAACTACGAGAAGGAACTGCAAGACATGAACAACATGACCCGCCAGGAATTTGTTGCTTCCCTCCGaagGAAGAGTAGTGGTTTTTCTAGAGGGGCTTCAATATACAGAGGAGTCACCAGGCACCACCAGCATGGGCGATGGCAAGCAAGAATAGGCAGAGTTGCCGGAAATAAAGACCTTTACCTTGGCACCTTTAGCACGCAAGAAGAAGCTGCGGAGGCATATGACATAGCAGCCATAAAATTCAGAGGACTAAATGCAGTGACCAACTTCGACATGAGCCGGTACGACGTGAAGAGCATAGCCAACACCAACCTTCCCATCGGCGGATTCTCCTCCAAATccgacaataataataataacaataattcatCTCTGCTTCTTCCCGATAAGGAACTCTCTACTACCTCACAAGTAGCCTCCTCAACCTCTAATCTCAGCTTCGCCATACCCATCATCAAACAAGACCCTAATAACTACTGCTCCAACATTCTTCTAGGCTACCCTAGTTCCCTCAAGAATTATAactcctcatcatcatcatcatctgccACCTTGCAAAGCTATAGCAATGATAGCGTTATTATTAGCAACACTTCACTAGCCTTAGTGGATGGATCGGGAGTGTATGTTGAGCAGCAACAAAGTGGAAGCAATAGTATTAGTAGTAGTGTGGGTTCAGCTTCAGCACTCCCAATTGGTATAAATAGTTATAATGAGAGGGGATATGGAAACTGGAGTAGTAGTATTGGACCTGCTCTCCACACTACATTCCAAACGCATGCAACAAGCAGTGTGTTTCAAACGCCCATCTTTGGGATGGAATGA 1260 0.4524 MKTIPPSFLQQAPPPKQTTVVPPSPKKASDTFGQRTSIYRGVTRLLSLRIDGRGDMKLIYGITAAEERGKVGKEGKILIYMLFLLFARVVPDESSSLLADPWGAFMVSSVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKELQDMNNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANTNLPIGGFSSKSDNNNNNNNSSLLLPDKELSTTSQVASSTSNLSFAIPIIKQDPNNYCSNILLGYPSSLKNYNSSSSSSSATLQSYSNDSVIISNTSLALVDGSGVYVEQQQSGSNSISSSVGSASALPIGINSYNERGYGNWSSSIGPALHTTFQTHATSSVFQTPIFGME 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1126 419 SUPERFAMILY DNA-binding domain 177 238 IPR016177 GO:0003677
Sto3g1126 419 Pfam AP2 domain 178 228 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 CDD AP2 101 144 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL5 19 418 - -
Sto3g1126 419 CDD AP2 177 238 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 ProSiteProfiles AP2/ERF domain profile. 178 236 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 MobiDBLite consensus disorder prediction 1 31 - -
Sto3g1126 419 ProSiteProfiles AP2/ERF domain profile. 38 142 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 418 - -
Sto3g1126 419 Gene3D AP2/ERF domain 178 238 IPR036955 GO:0003700|GO:0006355
Sto3g1126 419 Gene3D AP2/ERF domain 39 144 IPR036955 GO:0003700|GO:0006355
Sto3g1126 419 SUPERFAMILY DNA-binding domain 108 144 IPR016177 GO:0003677
Sto3g1126 419 SMART rav1_2 101 148 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 SMART rav1_2 178 242 IPR001471 GO:0003700|GO:0006355
Sto3g1126 419 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1126 Sto-Chr3 7993838 7995926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1126 7 419 AP2-EREBP Transcription Factor Family AT5G57390 47.235 3.39e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto3g1126 AP2 2.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1126 K09285 - jre:108998775 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1126 3 7993838 7995926 Sto3g1126 3 7993838 7995926 ECH